Gene PXO_04501 details

Gene Information

• Locus tag: PXO_04501
• Symbol: rplO
• ID: 6304787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1265875
• End bp: 1266318
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642638561
• Product: 50S ribosomal protein L15
• Protein accession: YP_001912438
• Protein GI: 188575509
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.320806
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCTGC GTCTTAATGA CCTCAAGCCG GCCGACGGCG CCCGTACCCA GCGCACCCGC 
GTCGGTCGTG GTATCGGTTC AGGCCTCGGC AAGACCGCTG GTCGCGGTCA CAAGGGTTCA 
TTCGCTCGTA AGGGTGGCGG CAAGATCAAG GCCGGCTTCG AAGGCGGCCA GACCCCGATG 
CAGCGCCGTC TGCCGAAGAT CGGTTTCCGC TCCAAGATGG CGCGCGATAC CGCAGAAGTG 
TTGTCCTACC AGCTGGATAA GCTGGATGCC GGTGATGTCG ACTTTGTAGC GCTGCGTGCG 
GCCAATCTGG TTCCGAGCCG CGCCAAGAAG GCGAAGATCG TGCTGAAGGG CGAGCTGAGC 
AAGAAGTTTG TGCTGAAGGG CGTTGCGGCG ACCGCAGGCG CCAAGGCAGC AATCGAAGCT 
GCCGGCGGCA GCGTAGAGGA GTAA 

 

Protein sequence

MTLRLNDLKP ADGARTQRTR VGRGIGSGLG KTAGRGHKGS FARKGGGKIK AGFEGGQTPM 
QRRLPKIGFR SKMARDTAEV LSYQLDKLDA GDVDFVALRA ANLVPSRAKK AKIVLKGELS 
KKFVLKGVAA TAGAKAAIEA AGGSVEE