| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04498 |
|---|
| Symbol | rpsK |
|---|
| ID | 6304790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1268390 |
|---|
| End bp | 1268782 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642638564 |
|---|
| Product | 30S ribosomal protein S11 |
|---|
| Protein accession | YP_001912441 |
|---|
| Protein GI | 188575512 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.846656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGC CAGTAGAAAA GAAAACGAAG AAGAAGATCA AGCGCGTCAT CACCGACGGC
GTCGCTCACG TCCATGCTTC GTTCAACAAC ACCATCGTCA CCATCACCGA TCGCCAGGGC
AATGCGCTGT CGTGGGCTAC GTCCGGCGGC GCCGGTTTCC GTGGTTCGCG CAAGTCGACC
CCGTTCGCTG CTCAGGTTGC CGCCGAAAAG GCTGGCCGCG CTGCGCTCGA CTACGGCGTG
AAGTCGCTGG AAGTGCGTAT CAAGGGTCCG GGTCCGGGCC GTGAGTCGGC CGTGCGTTCG
TTGAACAACG TGGGCTACAA GATCACCAAC ATCATCGACG TGACGCCAAT CCCGCACAAC
GGGTGCCGTC CGCCGAAGAA GCGTCGCGTC TAA
|
|---|
| Protein sequence | MAKPVEKKTK KKIKRVITDG VAHVHASFNN TIVTITDRQG NALSWATSGG AGFRGSRKST
PFAAQVAAEK AGRAALDYGV KSLEVRIKGP GPGRESAVRS LNNVGYKITN IIDVTPIPHN
GCRPPKKRRV
|
|---|
| |