| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04477 |
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| Symbol | raxB |
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| ID | 6304812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1285457 |
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| End bp | 1287616 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642638585 |
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| Product | colicin V secretion/processing ATP-binding protein CvaB/putative ABC transporter protein required for AvrXa21 activity B (raxB) |
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| Protein accession | YP_001912462 |
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| Protein GI | 188575533 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.265194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCT GGTTGGCGCA GCTGCGCAGA GCGTCCGGCG CACGCGCGCT GCCGATGATC
TTGCAGGGGC AGGTCGGCGA ATGCGGATTG GCGGCCATGG CCATGATCGC CCACTACCAC
GGTTGCCAGA TTGGTCTGGC CGAACTGCGT CGTCGTTTCC TGCTGTCGCG CCAGGGAACC
AACCTGGCCA ATCTGGTCGC GATCGCGCAG GCGCTCGGTT TGCAGGCGCG CGCGCTAAGG
CTGGAGATGG ACGGGGTGCC GGATCTGCAA CTGCCCTGCA TCGTGCATTG GGATCTGAAT
CATTTCGTGG TGCTCAAGCG GGTGGGCACC CGCCGTCTGC AGATCCACGA TCCGGCCAGC
GGGCCGCGTG GGCTCACGCC GGGTGAATTC GCTCGGCATT TTTCCGGGAT CGCGCTGGAA
CTCAGCCCGA CGGCCGACTT CCGTGCGCAA TCTGCGGCAC CGCCAGTGGC ATTGTCCTCG
TTGATCGGTC GCGTCCACGG GCTTGGACGG GCTGTCTGGC AGGTGCTGGC GTTGGCATTC
GCGCTGGAGG TGCTCAGCCT GGGCATGCCG TTCCAACTGC AGTGGATCGT CGATCAGGCG
GTGCCGTCGG CCGACATCGG GCTGATCCAT GTCCTCGGTG CCGGGTTCCT GCTGCTGGTG
GTGCTGCAGT CCTGCATCGG TCTGCTGCGT GGATGGTTGA TCGCCAGCGT TTCGGCGCAG
TTGGGCTTTC AATGGATGGG GCAGGTCTTC GCGCACCTGC TCGCGCTGCC GTTGGCGTAT
TTCGAGAAGC GTCACCTCGG CGGCATCCAG TCGCGTTTCG CCTCGATCAC GCAGGTACAG
CGCACCTTGA CGACCGGATT CACCCAGACG TTGGTCGATG GTGTGCTGGT GGTCGGCACC
CTGGGCCTGA TGCTGGTGTA CAGCGCTGGC CTCAGCGCGA TCACGCTGGT GGCGGTGGCG
CTGTATGCGG CGACGCGTCT GCTGTGGCTG AGCCGGATGC GCGAGGCGAC AGCCGAGCAG
CTGCTGTGGG ACGGGCGCCA GCACACCCAC TTGCTGGAAA GCGTGCGCTG CATCCAGGGC
GTGCGGCTGT TCGGTCGCCA GCAGGTGCGG CGCATGGATT GGACCCATCT GCTGGCCGAA
CAGACCAATG CGCAACTGCG CCTGGCGCAG GGTGAGGTCT GGCAGTCGGC GATCAAGCTC
TTGCTGTTTG GGGGCGAGCG CGTGCTGGTG ATCTGGCTTG CCGCGTTCGC GATCCTGCGC
GCGGAGCTAT CGCTGGGCAT GCTGCTGGCG TTCATGGCCT ATCGCGAGCA ATTCGCCATG
CGCTTGTCCG CGCTGATTGA CCGGCTGGTG GAGTTCCGCC TGCTGCGCGT CCATCTGGAG
CGGGTGGCCG ACATCGTCCA TCAGCCGCGC GAAGATGCCG ATCAGCGGGT TGATGCGCCA
GACTGGAGCG ATACCACCAT CGAAGTGTGT GGCATCGGTT TTCGCTACGC TGACGATGCC
CCTGCGGTGC TCGAAGAGGT CAACATACGG ATTGGCAGCG GCGAATGCGT GGCCATTACC
GGCCCGTCAG GATGCGGCAA GACCACCCTG GTGAAAGTGA TCCTCGGGCT GCTGCAACCC
AGTACCGGGC AAGTGAAGAT CGGCGGGCGT CCGCTGACCC GCGCAGCGCT GGCGCACTAT
CGGGGCATTG TCGGCACGGT GATGCAGGAC GATCTGCTGT TCACCGGTTC TGTGAGCGAG
AACATCAGTT TTTTCGACCC GGAGCCGGAC CAGGGGCAGA TCGAACGCTG CGCGCGCATC
GCTGGCGTAC ACCAGGAGGT GGAGCAGATG CCGCTTGGCT ACGCGTCGTT GTTGAGCGAG
GCCGGCACCG GCTTGTCGGG CGGGCAGCGG CAACGCGTCT TGCTGGCGCG CGCCCTGTAC
AGGGCGCCGC GCATCCTGGT GCTGGACGAG GCGACCAGCC ATCTGGACGT CATCAATGAG
CACCGCGTCA ATCACGCCAT CCAGGCGATG CAGGTGACCC GGATCATCGT GGCGCATCGG
CGCGAAACGG TCAGCATGGC CGCGCGGGTC ATCACCCTGG AACGGGGACG GGTGACGAGC
GATCAGCCCA TCGCCGCATG GCAGCGCCTG CAGGAGCACT CCGCCGCCGC TGCCGACTGA
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| Protein sequence | MSRWLAQLRR ASGARALPMI LQGQVGECGL AAMAMIAHYH GCQIGLAELR RRFLLSRQGT
NLANLVAIAQ ALGLQARALR LEMDGVPDLQ LPCIVHWDLN HFVVLKRVGT RRLQIHDPAS
GPRGLTPGEF ARHFSGIALE LSPTADFRAQ SAAPPVALSS LIGRVHGLGR AVWQVLALAF
ALEVLSLGMP FQLQWIVDQA VPSADIGLIH VLGAGFLLLV VLQSCIGLLR GWLIASVSAQ
LGFQWMGQVF AHLLALPLAY FEKRHLGGIQ SRFASITQVQ RTLTTGFTQT LVDGVLVVGT
LGLMLVYSAG LSAITLVAVA LYAATRLLWL SRMREATAEQ LLWDGRQHTH LLESVRCIQG
VRLFGRQQVR RMDWTHLLAE QTNAQLRLAQ GEVWQSAIKL LLFGGERVLV IWLAAFAILR
AELSLGMLLA FMAYREQFAM RLSALIDRLV EFRLLRVHLE RVADIVHQPR EDADQRVDAP
DWSDTTIEVC GIGFRYADDA PAVLEEVNIR IGSGECVAIT GPSGCGKTTL VKVILGLLQP
STGQVKIGGR PLTRAALAHY RGIVGTVMQD DLLFTGSVSE NISFFDPEPD QGQIERCARI
AGVHQEVEQM PLGYASLLSE AGTGLSGGQR QRVLLARALY RAPRILVLDE ATSHLDVINE
HRVNHAIQAM QVTRIIVAHR RETVSMAARV ITLERGRVTS DQPIAAWQRL QEHSAAAAD
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