Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04472 |
Symbol | |
ID | 6304815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1291574 |
End bp | 1293172 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642638588 |
Product | inner membrane protein |
Protein accession | YP_001912465 |
Protein GI | 188575536 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.898006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGACCG AAGCGCTGGT ACTGCTGTCG AGTTTATTTT TTGCATTCGT CTGCAATCAG CTCTTCTGGC GCACGGCCAT GGCCACGCAT CCGGGCAGCA TTGGATTTGG CATCTCGTTG ATGGCGTTGC TGGTGGCCGT GCATGCGCTG CTGTTGGGCA TCGTGGTGTG GCGCTGGAAT GCAAAGCCGC TGCTGACGCT GTTGCTGTTT ACCACCGCCC TGGCCGCGCA CTACATGGAC AGCTACAACG TCTATCTGGA TGCGGACATG CTGCGCAACG TGCTGCATAC CGATCACAAG GAATCGCGTG AGCTGCTCAC GCCGGGCCTG ATCCTGCCGC TGCTGTGCTA CTTCCTGATC CCGAGCGCGC TGCTATGGCG CACGCGTCTG CGCGCGCGCA GCGTGGGCAA GGCGTTCCTA GTGCGGGCAG GTTTTCTGCT GGTCGTGGCG CTGGTAGGTG CTGCGGGCAC CATGCTGTCA TCGCAGGATA TTTCCGCATT GATGCGCAAC CATCGCGAAG TGCGCTACCT GGCCACGCCG ATCAATTACA TCGTGGCACT GCGGCAGAAT CTCAAATCCG ATTCGCCGAT GAAGCGCGCG CCCAAGCAGC CGATCGAACA CGACGCCACG GCCACTCCGC GTGCGCCGGG CAGCCGCCCG CGTCTGTTGC TGGTGGTGCT GGGTGAAACC GCACGCGCGC AGAACTGGGG CCTCAACGGC TATGCCCGCC AGACCACGCC GGAGCTGGCG CAGACCGGGG TGATCAACTT CCCGGACATG CATTCGTGCG GCACCAGCAC CGAGGTCTCG GTGCCCTGCA TGTTCTCGCC GTACGGGCGT CGCGATTACA ACGAGGACAT GATTCGCGGC CATCAGTCGT TCCTGCACGT GCTGGAACAC GCCGGTATTT CGACGCTATG GCGCGACAAC CAGTCCGGCT GCAAGGGCGT GTGCGACGGG TTGGAGCTCC AGACGCTGGA CGATGCGACC ACACCGGGTC TGTGCGCCGA TGGCCGCTGC ATGGACGAGA TTTTGCTGAG CGACCTGGCC GCGCAGGTGC GCGCCAAGCC TGGCGACCGC GTGGTGGTGC TGCATCAACT GGGTAGCCAC GGGCCGAGTT ACTTCGAACG TTACCCGGCG CAGTTCGAAC GCTTCAAGCC CGTCTGCAAG ACCGCAGATC TGGGCAGCTG CAGCCGCCAG GACATCGTCA ACGCCTACGA CAATTCGCTC CTGTACACCG ACCATTTCCT CAATCAGGCC ATCTACACCC TGCGCGGTCT GCAGGACTAC GACACAACGA TGATCTATCT CTCCGATCAC GGCGAATCGC TCGGCGAAAA AGGCCTGTAT CTGCATGGCG TGCCGTATGC CATTGCGCCC AAGGAGCAGA CCCATGTGCC GATGGTGATG TGGTTCTCGC CGGAGTTCGC GCGCGATCGC GGCCTGGATG AAGCCTGCCT GCGCCATCGT GCAGGGCAAT ACACCGATCA GGACGCGCTT TTCTCGTCGG TACTGGGGTT GATGCAGGTC AAGACCAGCG TCTACGCGTC CGAGCGCGAT CTGTTCGCCA AGTGCACAGG CACGACGACG CTGCGCTGA
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Protein sequence | MSTEALVLLS SLFFAFVCNQ LFWRTAMATH PGSIGFGISL MALLVAVHAL LLGIVVWRWN AKPLLTLLLF TTALAAHYMD SYNVYLDADM LRNVLHTDHK ESRELLTPGL ILPLLCYFLI PSALLWRTRL RARSVGKAFL VRAGFLLVVA LVGAAGTMLS SQDISALMRN HREVRYLATP INYIVALRQN LKSDSPMKRA PKQPIEHDAT ATPRAPGSRP RLLLVVLGET ARAQNWGLNG YARQTTPELA QTGVINFPDM HSCGTSTEVS VPCMFSPYGR RDYNEDMIRG HQSFLHVLEH AGISTLWRDN QSGCKGVCDG LELQTLDDAT TPGLCADGRC MDEILLSDLA AQVRAKPGDR VVVLHQLGSH GPSYFERYPA QFERFKPVCK TADLGSCSRQ DIVNAYDNSL LYTDHFLNQA IYTLRGLQDY DTTMIYLSDH GESLGEKGLY LHGVPYAIAP KEQTHVPMVM WFSPEFARDR GLDEACLRHR AGQYTDQDAL FSSVLGLMQV KTSVYASERD LFAKCTGTTT LR
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