Gene PXO_04445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04445 
Symbol 
ID6304488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp986373 
End bp986990 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID642638263 
Producttrancated ISXo8 transposase 
Protein accessionYP_001912145 
Protein GI188575216 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0905837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATA GCGCACATGC GCCGATCTCG GTACATGAAG TCGCGCAGCG CTTGCCCGCA 
AGGACGTATC GGCAGGTCAG CTGGCGCCAG GGCAGCGACG CAACGCTCAG TTCGCGGTTC 
GCGGCGGTGC GGGTTCGTGC CGCACACAAT CGCCAGGCAC ATGACGAGCA GTGGCTGCTG 
ATCGAGTGGC CGCCGGGAGA GTCCGAGCCC CGCCACTACT GGTTCTCGAC GCGACCAAAG 
CAAACGCCGG TCAAGACACT GGTTGCCACG GCACAAGGCC GATGGCGGAT TGAACGCGAT 
TATCAGGAGC TGAAGTCGGA GTTGGGCCTG CATCACTATG AAGGGCGCAA CTGGCGTGGT 
TTTCACCATC ACGCCAGTCT GTGCATCGCC GCATACGGGT TCTTGATGCG CGAGCGCCTG 
CGCAGTAAAA AAACTCCGTC GCATTCAAGA TGCCTGCAGT ATCCAAAAGC GTCCGCCCGC 
GCCGGTCTGG CCCCAATGCA ACGTCACCAT CCCAACTCGA TTGCCACGCT GGCCTTCGGA 
CTGGCTAGGC TGATCGCCAG AAGCCTCCCA CACTGCCCGT GTTGCGGGGT CTCACCGTAC 
CAACGGATTC GGATTTAG
 
Protein sequence
MRDSAHAPIS VHEVAQRLPA RTYRQVSWRQ GSDATLSSRF AAVRVRAAHN RQAHDEQWLL 
IEWPPGESEP RHYWFSTRPK QTPVKTLVAT AQGRWRIERD YQELKSELGL HHYEGRNWRG 
FHHHASLCIA AYGFLMRERL RSKKTPSHSR CLQYPKASAR AGLAPMQRHH PNSIATLAFG 
LARLIARSLP HCPCCGVSPY QRIRI