Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04405 |
Symbol | glyA |
ID | 6304532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1023926 |
End bp | 1025179 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642638307 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001912189 |
Protein GI | 188575260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCGC GCGATGTCCG ACTGGAAACC TACGACCCCG AACTGGCCAA GGCCATCGCT GCTGAAGCCG GCCGCCAGGA GGATCACGTC GAGCTGATCG CCAGCGAGAA CTACTGCAGC CAGCTGGTGA TGGAAGCCCA GGGCAGCCAG CTGACCAACA AGTACGCCGA AGGCTACCCT GGCAAGCGCT ACTACGGCGG CTGCGCGTTC GTCGACATTG CCGAACAGCT AGCGATCGAC CGCATCAAGC AGGTCTTCGA TGCCGATTAT GCAAATGTGC AGCCGCACAG CGGCTCGCAG GCCAACCAGG CGGTGTATCT GGCGCTGCTG CAGCCGGGCG ACACCATTTT GGGCATGAGC CTGGCGCATG GCGGCCACCT GACCCACGGC GCCAAGGCCA ACGTCTCCGG CAAGCTGTTC AACGCGGTGC AGTACGGCGT CAACGAGCAG GGCCTGATCG ATTACGACGA AGTGCAGCGT CTTGCGACCG AGCACACGCC GAAGATGGTG GTGGCCGGTT TCTCGGCGTA TTCGCAGAAG ATCGACTGGG CCCGCTTCCG TGCCATTGCC GACAGCGTTG GCGCCTATCT GTTCGTGGAC ATGGCCCACA TCGCTGGCCT CGTGGCCGCC GGGGTGTATC CCAGCCCGAT GGAACATGCG CACGTGGTGA CGTCGACGAC GCACAAGACG CTGCGCGGTC CGCGTGGCGG CATCATCGTC GCCAAGGGCG CCAGCGAAGA ATTGCAGAAG AAGCTGCAGT CGATCGTGTT CCCCGGCATT CAGGGTGGCC CGCTGATGCA CGTGATCGCC GCCAAGGCGG TTGCGTTCAA GGAAGCACTG GAGCCGGCGT TCAAGACCTA CCAGCAACAG GTGGTCAAGA ATGCTCAGGC GATGGCCAAC ACGCTGATCG CACGCGGGTA CAAGATCGTC TCCGGCGGCA CCGAAAACCA TCTGATGCTG GTCGACATGA TCGGCCGCGA CGTCTCCGGC AAGGATGCCG AAGCCGCGCT GGGCAAGGCG CACATCACCG TCAACAAGAA CGCGGTGCCC AACGACCCGC GCTCGCCGTT CGTTACCTCG GGCCTGCGCT TGGGTACCCC GGCAATCACC ACGCGCGGTT ACAAGGAACC GGACAGCATC GATCTGGCCA ACTGGATCGC CGATGTGCTC GACGCCCCGA CCGACGAAGC GGTGCTGGCG AAAGTGCGCG ATGCAGTGAC CGCGCAGTGC AAGCGTTATC CGGTGTACGG CTGA
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Protein sequence | MFSRDVRLET YDPELAKAIA AEAGRQEDHV ELIASENYCS QLVMEAQGSQ LTNKYAEGYP GKRYYGGCAF VDIAEQLAID RIKQVFDADY ANVQPHSGSQ ANQAVYLALL QPGDTILGMS LAHGGHLTHG AKANVSGKLF NAVQYGVNEQ GLIDYDEVQR LATEHTPKMV VAGFSAYSQK IDWARFRAIA DSVGAYLFVD MAHIAGLVAA GVYPSPMEHA HVVTSTTHKT LRGPRGGIIV AKGASEELQK KLQSIVFPGI QGGPLMHVIA AKAVAFKEAL EPAFKTYQQQ VVKNAQAMAN TLIARGYKIV SGGTENHLML VDMIGRDVSG KDAEAALGKA HITVNKNAVP NDPRSPFVTS GLRLGTPAIT TRGYKEPDSI DLANWIADVL DAPTDEAVLA KVRDAVTAQC KRYPVYG
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