Gene PXO_04405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04405 
SymbolglyA 
ID6304532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1023926 
End bp1025179 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID642638307 
Productserine hydroxymethyltransferase 
Protein accessionYP_001912189 
Protein GI188575260 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCGC GCGATGTCCG ACTGGAAACC TACGACCCCG AACTGGCCAA GGCCATCGCT 
GCTGAAGCCG GCCGCCAGGA GGATCACGTC GAGCTGATCG CCAGCGAGAA CTACTGCAGC
CAGCTGGTGA TGGAAGCCCA GGGCAGCCAG CTGACCAACA AGTACGCCGA AGGCTACCCT
GGCAAGCGCT ACTACGGCGG CTGCGCGTTC GTCGACATTG CCGAACAGCT AGCGATCGAC
CGCATCAAGC AGGTCTTCGA TGCCGATTAT GCAAATGTGC AGCCGCACAG CGGCTCGCAG
GCCAACCAGG CGGTGTATCT GGCGCTGCTG CAGCCGGGCG ACACCATTTT GGGCATGAGC
CTGGCGCATG GCGGCCACCT GACCCACGGC GCCAAGGCCA ACGTCTCCGG CAAGCTGTTC
AACGCGGTGC AGTACGGCGT CAACGAGCAG GGCCTGATCG ATTACGACGA AGTGCAGCGT
CTTGCGACCG AGCACACGCC GAAGATGGTG GTGGCCGGTT TCTCGGCGTA TTCGCAGAAG
ATCGACTGGG CCCGCTTCCG TGCCATTGCC GACAGCGTTG GCGCCTATCT GTTCGTGGAC
ATGGCCCACA TCGCTGGCCT CGTGGCCGCC GGGGTGTATC CCAGCCCGAT GGAACATGCG
CACGTGGTGA CGTCGACGAC GCACAAGACG CTGCGCGGTC CGCGTGGCGG CATCATCGTC
GCCAAGGGCG CCAGCGAAGA ATTGCAGAAG AAGCTGCAGT CGATCGTGTT CCCCGGCATT
CAGGGTGGCC CGCTGATGCA CGTGATCGCC GCCAAGGCGG TTGCGTTCAA GGAAGCACTG
GAGCCGGCGT TCAAGACCTA CCAGCAACAG GTGGTCAAGA ATGCTCAGGC GATGGCCAAC
ACGCTGATCG CACGCGGGTA CAAGATCGTC TCCGGCGGCA CCGAAAACCA TCTGATGCTG
GTCGACATGA TCGGCCGCGA CGTCTCCGGC AAGGATGCCG AAGCCGCGCT GGGCAAGGCG
CACATCACCG TCAACAAGAA CGCGGTGCCC AACGACCCGC GCTCGCCGTT CGTTACCTCG
GGCCTGCGCT TGGGTACCCC GGCAATCACC ACGCGCGGTT ACAAGGAACC GGACAGCATC
GATCTGGCCA ACTGGATCGC CGATGTGCTC GACGCCCCGA CCGACGAAGC GGTGCTGGCG
AAAGTGCGCG ATGCAGTGAC CGCGCAGTGC AAGCGTTATC CGGTGTACGG CTGA
 
Protein sequence
MFSRDVRLET YDPELAKAIA AEAGRQEDHV ELIASENYCS QLVMEAQGSQ LTNKYAEGYP 
GKRYYGGCAF VDIAEQLAID RIKQVFDADY ANVQPHSGSQ ANQAVYLALL QPGDTILGMS
LAHGGHLTHG AKANVSGKLF NAVQYGVNEQ GLIDYDEVQR LATEHTPKMV VAGFSAYSQK
IDWARFRAIA DSVGAYLFVD MAHIAGLVAA GVYPSPMEHA HVVTSTTHKT LRGPRGGIIV
AKGASEELQK KLQSIVFPGI QGGPLMHVIA AKAVAFKEAL EPAFKTYQQQ VVKNAQAMAN
TLIARGYKIV SGGTENHLML VDMIGRDVSG KDAEAALGKA HITVNKNAVP NDPRSPFVTS
GLRLGTPAIT TRGYKEPDSI DLANWIADVL DAPTDEAVLA KVRDAVTAQC KRYPVYG