Gene PXO_04403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04403 
SymbolnrdR 
ID6304534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp1025744 
End bp1026232 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID642638309 
Producttranscriptional regulator NrdR 
Protein accessionYP_001912191 
Protein GI188575262 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.697119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGATT CGCGGGTGTC CGAAGACGGC ACGACGATTC GTCGGCGCCG TGAGTGCGAG 
GCATGCGGTG AGCGTTTCAG CACGTTGGAA ACGATCGAAC TGAAGTTGCC CACCGTGGTC 
AAGAGCGATG GTGGGCGCGA AGCGTTCGAT GCACGCAAGC TGCGCACCAG TTTCGACCGC 
GCGCTGCAGA AGCGGCCGGT GGCCGAGGAA CAAATCGAAG CAGCGGTACG CTCAGTCGTG 
CATCAGCTGC GGATGTCGGG CGAGCGCGAA GTGGGCTCGC TGCGCGTAGG CGAATACGTG 
ATGGTGGAGC TGCGCAAGCT CGATCATGTC GGCTATGTGC GCTTTGCTTC GGTGTATCGC 
AGTTTCCAGG ACGTGGCCGA TTTTCGTGAG GAAATCGAGA AGCTCGAACG CGAACTGCCG 
GTCGGCAGCG AACAACTGCC ATTGCTGGAA GTGGCACTGG AACGCGCCGG CAAGCCCGGC 
AAGCGATGA
 
Protein sequence
MIDSRVSEDG TTIRRRRECE ACGERFSTLE TIELKLPTVV KSDGGREAFD ARKLRTSFDR 
ALQKRPVAEE QIEAAVRSVV HQLRMSGERE VGSLRVGEYV MVELRKLDHV GYVRFASVYR 
SFQDVADFRE EIEKLERELP VGSEQLPLLE VALERAGKPG KR