Gene PXO_04399 details

Gene Information

• Locus tag: PXO_04399
• Symbol: ribE
• ID: 6304538
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1029060
• End bp: 1029662
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642638313
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001912195
• Protein GI: 188575266
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTG GAATCATCGA AGGCGTCGGC CAGCTAGCGG CGCGTCAGCC GCAGGGCGGC 
GATGTACGTT TCACCTTCGC CACCGGCACG CTGCCGTTCG AGTCTGTCCA GTTGGGCGAG 
AGCATTGCGG TCAATGGCGT GTGTCTGACC GTGGTTGCGT TTGATGCAGC CAGTTTTCAG 
GCCGATGCCT CCACCGAAAC CCTGTCGCTG ACCACGCTGG GCGCACTGCC GGAAGGCGCG 
CTGCTCAATC TGGAACGCGC GATGCGCCCG ATCGACCGCC TGGGCGGGCA CCTGGTCAGC 
GGACATGTGG ATGGCCTGGG CCAGGTGCAG TCTGTCCATG ACGATGCACG CGCGCAGCGC 
TGGCGGTTTG CCGCGCCGCC GGCGGTGTTG CGCTATGTGG CCAAGAAGGG CTCGATCTGC 
GTAGACGGCG TCAGCCTCAC CGTCAATGAA GTGGACGAAG AAGGCTTCGA AGCGGCGTTG 
ATTCCGCATA CGATGGCCAA CACCGCGTTT GCGCAGACGG CAGTGGGTGC GACGGTGAAT 
CTGGAAATCG ATCTGGTGGC GCGCTATGTC GAACGCCTGC TCGGCACGCG GGGTACGGCA 
TGA 

 

Protein sequence

MFTGIIEGVG QLAARQPQGG DVRFTFATGT LPFESVQLGE SIAVNGVCLT VVAFDAASFQ 
ADASTETLSL TTLGALPEGA LLNLERAMRP IDRLGGHLVS GHVDGLGQVQ SVHDDARAQR 
WRFAAPPAVL RYVAKKGSIC VDGVSLTVNE VDEEGFEAAL IPHTMANTAF AQTAVGATVN 
LEIDLVARYV ERLLGTRGTA