Gene PXO_04385 details

Gene Information

• Locus tag: PXO_04385
• Symbol: kdpC
• ID: 6304552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1040305
• End bp: 1040967
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642638327
• Product: potassium-transporting ATPase subunit C
• Protein accession: YP_001912209
• Protein GI: 188575280
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2156] K+-transporting ATPase, c chain
• TIGRFAM ID: [TIGR00681] K+-transporting ATPase, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.748158
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATGCACC TTTCTTCTTC TGAGATCATG TCCATGTCTT CTTCCTTGCC GTTACGCGAC 
GACGGCGCCC TGCGCGGTTC GCTGATGCTC GCGGTATTCA CCCTGTTCGG CCTGGGCCTG 
GCCTACTCGC TGGTCGCCAC CGGCATCACC GGCGCACTGT TCTCCGAGCA AGCCACCGGT 
TCGCTGGTGC GTGTCGATGC GCGCGTTGTC GGCTCGGCAT TGGTTGCGCA GCCGTTTACC 
GATGCGCGCT ATTTTCAGCC GCGTCCGTCG GCCGCCAAGT ACGACCTCAC CGCCGCGTCG 
GGCAGTAACC AGGCACGCTC CAATCCCGAT TTGCTGGCCC GTATCGCTGC CACCCGTGCG 
CAAGTGGCCA AACGCGACGG CATCGCCCCG GAGGCGGTGC CGGGCGAGCT GCTGACGCAA 
TCCGGCAGTG GCCTGGACCC GCACCTGAGC CCGGCCGGCG CACAGGTGCA GATCCGCCGC 
GTGGCCGCCG CACGCGGCTT GCCCGAGCAA CGCGTTGCTG CACTGGTGCA AGCTGCGACC 
GAAGCGCCAC AGTTCGGTCT GCTTGGGCAA CCGCGGGTCA ACGTGCTCGC CCTGAATCTG 
GCGCTGGATA AGGCCGGCAA TGGGGAGTCG GGAAGGGACA ATGGTGTGAA GCAAGCGTAC 
TAG 

 

Protein sequence

MMHLSSSEIM SMSSSLPLRD DGALRGSLML AVFTLFGLGL AYSLVATGIT GALFSEQATG 
SLVRVDARVV GSALVAQPFT DARYFQPRPS AAKYDLTAAS GSNQARSNPD LLARIAATRA 
QVAKRDGIAP EAVPGELLTQ SGSGLDPHLS PAGAQVQIRR VAAARGLPEQ RVAALVQAAT 
EAPQFGLLGQ PRVNVLALNL ALDKAGNGES GRDNGVKQAY