Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04382 |
Symbol | |
ID | 6304555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1044399 |
End bp | 1045784 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642638330 |
Product | D-lactate dehydrogenase |
Protein accession | YP_001912212 |
Protein GI | 188575283 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG TACTTCCCAC CGCACTTGCC GAGCTGTTGG CCGCGCGCCT GGATGCCGAT GGCTGGTTGA CCGGCGACGA TGCGCGCCGC CGCTATGGCG AAGACGATTC GCGCCGCTGG GCATTGCCTG CTGCCGTCGC CTTGCCGCGC GACACCGATG ACGTCGTGGC GATCGTGCAG GCGTGTCGCG CCTATGGCGT GCCGATCGTG GCGCGCGGCG CCGGCACCGG CACCACCGGC GCGGCAGTGC CATTTTCCGG CGGCGTGGTG CTGTCGATGG CGCGCATGAA TCGCATCGTT GCGCTGCGAC CGGAAGACCG CTGCGCAGTG GTGCAACCGG GCCTGCTCAA TGGCGACTTG CAGCAGGCGC TGCAGCCGCA TGGATTGTTC TGGCCACCGG ATCCGTCCAG CGCGGAGATC TGCAGTATCG GCGGCAATTT ATCCACCAAC GCCGGTGGAC CGCGCGCGGT GAAATACGGC GCCACCCGCG ACAACGTACT CGGCCTGGTG GCGGTGACCG GCACCGGCGA AGTGATCCGC TGCGGCGGTG CGTACACCAA AAATTCCACC GGCTACGACC TGACGCATCT GTTGGTCGGC AGCGAAGGCA CCTTGGCGAT CATCATCGAG GCCACGTTGA AACTGACCCC GCGCGCAATC GCACAGGCCG GCTTGCGCGC GCTGTATCGC GATGCGTCCA GCGCCGCAGC GGCGGTGTCG CGGCTGATGG CGCAACCGAC CACGCCGACC ATGCTGGAAT TCATGGATGC CAGCGCGATC GCACTGCTAC GCCGCAACGG CAGCGACGTG CCCGACGCCG GCGCCATGCT GTTGATCGAA GCCGATGGCG ATCACGACAC ACTGCCTTAC GCATTGCAGG CCCTGCACGA TGCCGCCGAT GGCGAAGGCG TGCTGAGCCT GGACGTGGCC GCCGATGGCA GCGCACGCGA CAAGTTGTGG GCGGCACGCC GCGCCCTGTC GCCGGCCTTG CGCACCATCA AACCCGGCAA GATCAACGAA GACGTGGTGG TGCCGGTGTC GCGCATTCCC GCACTGGTGG CCGGCGTGGA AGCGCTCGCT GCCGAATTCA CATTGCCCAT CGTCGCCTTC GGCCATGCCG GCAACGGCAA CCTGCACGTC AACATCATGT ACGACCCGGC CGATGCCGAC GAAGATGCGC GTGCGCATGC CGCGCTGCCC CGTCTGTTTA CGCTGGTGCT GGGACTGGAA GGCACGCTCT CCGGCGAACA CGGCATCGGC GTGGCCAAAC GCGATTTCAT GGCACAGGCG TTCAGCGCAT CCACGCTGGC GGCGATGCGT GCGATCAAGG CCGCACTGGA CCCGGATGGG ATCTTGAATC CTGGCAAGGT GTTGCCGCCC GCCTAG
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Protein sequence | MTDVLPTALA ELLAARLDAD GWLTGDDARR RYGEDDSRRW ALPAAVALPR DTDDVVAIVQ ACRAYGVPIV ARGAGTGTTG AAVPFSGGVV LSMARMNRIV ALRPEDRCAV VQPGLLNGDL QQALQPHGLF WPPDPSSAEI CSIGGNLSTN AGGPRAVKYG ATRDNVLGLV AVTGTGEVIR CGGAYTKNST GYDLTHLLVG SEGTLAIIIE ATLKLTPRAI AQAGLRALYR DASSAAAAVS RLMAQPTTPT MLEFMDASAI ALLRRNGSDV PDAGAMLLIE ADGDHDTLPY ALQALHDAAD GEGVLSLDVA ADGSARDKLW AARRALSPAL RTIKPGKINE DVVVPVSRIP ALVAGVEALA AEFTLPIVAF GHAGNGNLHV NIMYDPADAD EDARAHAALP RLFTLVLGLE GTLSGEHGIG VAKRDFMAQA FSASTLAAMR AIKAALDPDG ILNPGKVLPP A
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