| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04370 |
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| Symbol | |
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| ID | 6304566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1056578 |
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| End bp | 1058089 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642638341 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_001912223 |
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| Protein GI | 188575294 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCA CCCCACTGTC ATTGATTGCG CATTGGGCCG GCGGCGAACT GCATGGCGAC
GACGCCATGA TCGATGCGGT CGGCAACGAC ACCCGCACGC TCGCCAATGG CAGCCTGTAT
AGCGCGCTGC GCGGCGAGCG TTTCGATGGA CATGACTTTG CCGCCGACGC CGTCGCGCGT
GGGGCCAGCG GATTGCTGGT GGAGCGCCTG CTGCCGGCGC TGAGCGTACC GCAGGTGGTG
GTGAAAGATA CCGAGCTGGC ACTGGCGCGG ATTGCTGCCA GTATGCAGCG CGACCGTGTC
ACGCGCGTGC TCGCGTTGAC CGGTTCCAAC GGCAAGACCA GCGTCAAGGC GCTGCTGCTG
TCGATCCTGC AGGAAGCCGG GCGCGTGGAG GGCACGACCG TGTACGCCAC GCCGGGCAAC
CGCAACAACG AGATCGGTTT GCCGCTGGCC GTGATTGCCG CGCCTGACGA TGCGGACTTT
GCGATCTACG AAATGGGTGC AGGCAAGCCG GGCGATATTG CCTATCTGAC CGATATCGCG
CAGCCGCATG TCGCGCTGGT CAACAACATC GCGCCCGCCC ATCTGGAACG CCTGGGCAGC
TTGCTCGGCG TTGCACAGAC CAAGGGCGCC ATCTACGCCG CGCTGCCCGC CGATGGCGTG
GCCGTGATCA ATGCCGATGA CGCTTTTGGC ATATGGTTCG AGCAGCAGTT GCAGGCGCAG
CCGGTGCAGG GACGTTGCAT CGTGCGCTAC GGCTTGCAGA TCGGTGCCGA TATCACGGCG
CGTCAGCTGC AACTGCAGGC TGGCGCTGCG CAGTTCACCT TGGTGACCCC GCAGGGCGAA
GCGCAGGTTG CACTGCCGTT GCCGGGCCGC CACAACGTGC TCAACGCCTT GGCGGCAACC
GGTCTGGCAC TTGGTGCCGG CATCGCCTTG CCGGTGATCG CGGCCGGTCT GGCGCAGGCG
CATCCGGTGG CCGGTCGGCA AATCGCGCAG ACCTTGCCGA GTGGCGCGGT GCTGATCGAC
GACAGCTACA ACGCCAACCC TGGCTCGCTG GATGCGGCCA TCGATGCGTT GGCCGCCGCA
CCCGGCGAAG GCTGGCTGGT GCTTGGCGAC ATGCGCGAAC TCGGCGCCGA AGGCCTCGCA
TTGCATGCCG CTGCCGGACG TCGCGCACGC GCGGCCAAGC TGCAGCGGCT GTACGCGCTG
GGCGAGCTCA GCGCCGCCGC GGCGCAGGCA TTTGGCGACG GCGGCCGCGT GTTCGCCACA
CACGGCGAGT TGATCGACGC CTTGCAGGCA GATCTGGTCG ATACCGCCAG CCGGGAAACA
CGCACACAGC AACACGCATC GGGAAATACG CAGGAACATG CAGTGATTCA CCAACAGAAA
TCGCCGTCCA CGGCCGCTCT TTCAGGTGCC GCCTCCATCA CGATCCTGGT GAAGGGTTCG
CGCGGCAGCG CGATGGACCG CGTCGTCACC GCGCTGCTCG CATCGGCGGA GGGCGCATCC
CATGCTGCTT GA
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| Protein sequence | MKLTPLSLIA HWAGGELHGD DAMIDAVGND TRTLANGSLY SALRGERFDG HDFAADAVAR
GASGLLVERL LPALSVPQVV VKDTELALAR IAASMQRDRV TRVLALTGSN GKTSVKALLL
SILQEAGRVE GTTVYATPGN RNNEIGLPLA VIAAPDDADF AIYEMGAGKP GDIAYLTDIA
QPHVALVNNI APAHLERLGS LLGVAQTKGA IYAALPADGV AVINADDAFG IWFEQQLQAQ
PVQGRCIVRY GLQIGADITA RQLQLQAGAA QFTLVTPQGE AQVALPLPGR HNVLNALAAT
GLALGAGIAL PVIAAGLAQA HPVAGRQIAQ TLPSGAVLID DSYNANPGSL DAAIDALAAA
PGEGWLVLGD MRELGAEGLA LHAAAGRRAR AAKLQRLYAL GELSAAAAQA FGDGGRVFAT
HGELIDALQA DLVDTASRET RTQQHASGNT QEHAVIHQQK SPSTAALSGA ASITILVKGS
RGSAMDRVVT ALLASAEGAS HAA
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