| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04358 |
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| Symbol | secA |
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| ID | 6304578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1070847 |
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| End bp | 1073585 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642638353 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001912235 |
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| Protein GI | 188575306 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACA GTCTGCTTAC CCGTGTCTTT GGCAGTCGTA ACGAACGCCA GCTGCGCCAG
CTCACCCGCC TCGTCACCCA GATCAATGCG CTGGAGCCGA CGATCGAGAA GCTCTCTGAC
GCCGAGCTGC AAGCCAAGAC CCCGGAGTTC AAGCAGCGGC TTGCCGCCGG TGAGTCCCTG
GACAAGATTC TTCCCGAAGC CTTTGCGGTG TGCCGCGAGG CCAGCCGCCG CGTGCTCGGC
ATGCGCCATT ACGATGTGCA GCTGATCGGC GGCATGGTGT TGCACCTGGG CAAGATCGCT
GAGATGCGCA CCGGCGAAGG CAAGACCCTG GTGGCCACGC TGCCGGTGTA CCTCAACGCG
CTGCAGGGCG AGGGCGTGCA CGTGGTCACG GTCAACGACT ACCTGGCGCG CCGCGACGCC
GCGCAGATGG GCAAGTTGTA CAACTGGCTG GGCCTGAGCG TAGGCGTGGT GTATCCGGGC
ATGCCGCACA GCGACAAGCG CGAGGCCTAC GGCAGCGACA TCACCTACGG CACCAATAAC
GAATTCGGCT TCGACTACCT GCGCGACAAC ATGGCGCTGT CGCGCGCCGA CCGCTACCAG
CGTACTCTGC ATTACGCGAT CGTCGACGAA GTGGACTCGA TCCTGATCGA CGAAGCGCGC
ACCCCGCTGA TCATCTCCGG CCCGGCCGAC GAGTCGCCGG AGCTGTACAT CCGCGTCAAC
CGCATCGTGC CGCAGCTGAC CAAGCAGGAA AGCGAAGAAG GCGAAGGCGA TTTCTGGGTC
GACGAGAAGG GCAAGCAGGT GCATCTGTCG GAGGCGGGCA TGGGCCACGC CGAAGAACTG
CTGCTGCAGG CCGGCATCCT GGAAAACGCC GAAGACGGCC TGTATGCCGC GCAGAACCTG
AGCGTGGTGC ATCACCTCAA CGCGGCGCTG CGTGCGCATG CGATCTATCA GCGCGATGTG
GATTACATCG TGCGCGATGG CGAAGTGGTG ATCGTGGACG AATTCACCGG CCGTACGCTG
TCCGGGCGGC GCTGGTCCGA CGGTCTGCAT CAGGCGGTCG AAGCGAAGGA AGGCGTGCCG
GTGCAGCGCG AAAACCAGAC GCTGGCCAGC ATCACCTTCC AGAACCTGTT CCGCATGTAC
AAGAAGCTGT CCGGCATGAC CGGTACGGCC GACACCGAAG CCTACGAATT CCAGAGCATC
TACGGCCTGG AAGTGGTGGT GATCCCGACC AACCGCCCGA CCGTGCGCAA GGACCATCCG
GACCAGGTGT TCCTCAACCG CAAGGGCAAG TTCAACGCGG TGCTGGCCGA CATCGAAGAC
TGTGCCAAGC GCGGTCAGCC GGTGTTGGTG GGGACGACCT CGATCGAGAC CTCGGAAATG
CTGTCCGAGC ATCTGCGCAA AGCCGGGGTG AAGCACGAAG TGCTCAACGC CAAGCAGCAC
GAGCGCGAAG CCACCATCGT GGCCAACGCC GGCCAACCGG GCGCGGTAAC CATCGCCACC
AATATGGCCG GTCGCGGTAC CGACATCGTG CTGGGCGGTT CGTTGGAATC GGAGTATCAC
GCCCTCGGCG AAGACGCCAC CGAAGACGCG CGCTTCAAGA TCAAGACCGA CTGGCAGCGT
CGTCATGACG CGGTCAAGGC GGCCGGCGGC CTGCACATCA TCGGTACCGA ACGCCACGAA
TCGCGGCGTA TCGACAACCA GCTGCGCGGC CGTGCCGGTC GTCAGGGCGA CCCGGGTTCG
TCGCGCTTCT ATCTGTCGCT GGAAGACAAT CTGATGCGCA TCTTCGCCTC GGACTGGGTC
CAGAAGGCGA TGCGCATGAT GGGCATGAAG GAAGACGACG TCATCGAAGA TCGCCTGGTC
AGCCGGCAGA TCGAAAAGGC GCAGCGCAAG GTGGAAGCGC ATAACTTCGA CATCCGCAAG
AACCTGCTGG ATTTCGACGA CGTCAACAAC GATCAGCGCA AGGTGATCTA CGCCCAGCGC
GATGAATTGC TGGACGCCGA GTCGGTCAAG GACAACGTCG ACGGGATTCG CGGCGATGTG
ATCTATGATC TGGTTGCACG CTTCGTGCCG CCCAATTCGG TGGACGAACA GTGGGACGTG
AAGGGCCTGG AAGCTACGCT GGAGTCCGAG CTGGGCGTGA CCTTGTCGCT GACCGACATG
GTGCGCACGC AAGAAGAGAT TGATGCCGAG CAGATTGCCG CCAAGGTGCA GGCAGCAGTG
GATGCGCACT TCGCCGAGAA GGAAGCGGCC GTGGGCAACG ACACCATGCG CGCGTTGGAA
AAGCACGTGA TGCTGACCGT GCTCGACCAG GGCTGGAAGG AGCACCTGGC CAAGATGGAT
TACCTGCGCC AGGGCATCTA TCTGCGCGGT TACGCACAGA AGCAGCCCAA GCAGGAATAT
AAAAAAGAAG CGTTCGAGCT GTTCTCCGAG ATGCTGGAGA ACGTCAAGCG TGAAGTGATC
CATCTGCTGG CGCGTGTGCG CATCCGCAGC GAAGAAGAAG TGGCCGAACT GGAAGAGCAG
GAACGTCTCC ATGCGCAGGC GCGCTTGATG GCCTCGCAAT TCCAGCACCA GGATGTGGGT
GGCTACGGCA CTGACGAGGA AGCCGCGCAG GTGCAGAGCG GCAACGCGCC GCTCCCGGTC
TCGCAGGTCA CCCGCGACGA GCCAAAGGTC GGCCGCAACG ATCCTTGCCC CTGCGGCAGC
GGCAAGAAGT ACAAGCACTG CCACGGTCAA CTCAGCTGA
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| Protein sequence | MINSLLTRVF GSRNERQLRQ LTRLVTQINA LEPTIEKLSD AELQAKTPEF KQRLAAGESL
DKILPEAFAV CREASRRVLG MRHYDVQLIG GMVLHLGKIA EMRTGEGKTL VATLPVYLNA
LQGEGVHVVT VNDYLARRDA AQMGKLYNWL GLSVGVVYPG MPHSDKREAY GSDITYGTNN
EFGFDYLRDN MALSRADRYQ RTLHYAIVDE VDSILIDEAR TPLIISGPAD ESPELYIRVN
RIVPQLTKQE SEEGEGDFWV DEKGKQVHLS EAGMGHAEEL LLQAGILENA EDGLYAAQNL
SVVHHLNAAL RAHAIYQRDV DYIVRDGEVV IVDEFTGRTL SGRRWSDGLH QAVEAKEGVP
VQRENQTLAS ITFQNLFRMY KKLSGMTGTA DTEAYEFQSI YGLEVVVIPT NRPTVRKDHP
DQVFLNRKGK FNAVLADIED CAKRGQPVLV GTTSIETSEM LSEHLRKAGV KHEVLNAKQH
EREATIVANA GQPGAVTIAT NMAGRGTDIV LGGSLESEYH ALGEDATEDA RFKIKTDWQR
RHDAVKAAGG LHIIGTERHE SRRIDNQLRG RAGRQGDPGS SRFYLSLEDN LMRIFASDWV
QKAMRMMGMK EDDVIEDRLV SRQIEKAQRK VEAHNFDIRK NLLDFDDVNN DQRKVIYAQR
DELLDAESVK DNVDGIRGDV IYDLVARFVP PNSVDEQWDV KGLEATLESE LGVTLSLTDM
VRTQEEIDAE QIAAKVQAAV DAHFAEKEAA VGNDTMRALE KHVMLTVLDQ GWKEHLAKMD
YLRQGIYLRG YAQKQPKQEY KKEAFELFSE MLENVKREVI HLLARVRIRS EEEVAELEEQ
ERLHAQARLM ASQFQHQDVG GYGTDEEAAQ VQSGNAPLPV SQVTRDEPKV GRNDPCPCGS
GKKYKHCHGQ LS
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