Gene PXO_04328 details

Gene Information

• Locus tag: PXO_04328
• Symbol: hmsH
• ID: 6304477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 971417
• End bp: 973459
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642638254
• Product: HmsH
• Protein accession: YP_001912136
• Protein GI: 188575207

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000786393
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGTCA GAAAATTCCC CCTCGCTGTC TGCGTCTGCC TGACATGCGC CACGGTTACG 
CCCGGGGGAC ATGCAGCCAC CTCAAGCCTC GGCGCGTCGC GTGCCGACCA GCTTGCCGAG 
ATCAGCCGTT ACCGCGATCA GGCTCGCTGG GTCGACGCAC TCGCCGCGAT CGAGCGAGCC 
CAATCGGAAC AATCCGACGA CACCCTGCTG TACAAGCTGC AGACGCTGAC GCTGAGCGAC 
ATCGGCAATG CCTGGCTCGC CTGGCAGTTG TGCAAGGCGC GCCCGGACCT GTTTGACCAG 
GACCAGAAGG CGCACCTGGA GTCGAACTAC CTAGCCAAGC TGGTGAACTG GAGTCTGGCC 
TATGGCGAAA GCGAAGACAC CCGTCTGACC GAGGCCGAAG ACGCGCTGGC GCAGATGGAG 
CAGTACGTGC AGCGCAAGGC CCGCCCGCCG GCACAGGTAC CACTGCGCAT CCGCATGGAT 
CGCCTGATCC TACTCAACCG TCTGGGCAGG CATTCCCAGG TGCGCGACGA AGCCAACGCC 
CTGCAACGGG AAGGCCATCC CCTCCCCGAC TATGTGCTGC CGGCGGTGAG CGATTCGATG 
ATGGCGACCC GGCAACCGGC CGAAGCGATC CCACTGCTGA AAACCGTCCT GAAGAACGAA 
CCGGGGCGCT CCCAGTCACG CTCGCAGCTT GTCTACGCCT ACCTGGAGAC CGAACAGGCG 
GAAAAAGCAA TCGACTACCT GCAATCCTGG AAGAAGGACG AGCCAGCGTG GCGCTGGGGC 
GGCGGCAAGA GCCGCTATGC CAACTGGGCC CGTTACGAAG CCGACCTGAA CATGGCCATG 
ATCCACGCCT ACAGCGGCGA CCTGCCCACC GCGCAGCGGG CGCTGGAAGG CCTGCTGGCG 
GTCGGCCCCG GCAACGGCGG CCTGCAGACC GCACTGGGCA GTGTGTATCA GATGCGTGGT 
TGGCCACGCC GGGCGCTGGA ACGGCATCAG ATGGCCTACA CGCTGGACCC GCGCGATGTA 
TCGCCACGCA TCGGCATGTA CGAATCCTAT ATCCAATTGC AGCGCGACGA CCTGGCCCGC 
CCCTTGCACG ACAGCCTGCT CGCCCGCTAT CCCAACCAGC CTTCCGTGCT GCACATGGAC 
CGCGACTGGC GCGCCCACCG TGGCTGGCAA CTACAGGCCG CCGCCGAAGG CAGCCACAGT 
TCAAGCGGCG GCGGGAACTC GCCACTGGGC AATAACGACC AGCACTACAG CATGGAAGCG 
GACTCGCCGA TCCTGGACGA CCGCTGGCGT CTGTTCGCCT CCGCCGATCG GCGCTCTGTC 
ACCTTCCAGA ATCGCTACAT CGCTCCCTTG TGGCTCAGTG GCGGCGTGCG CTATCGCTTC 
GGTCACATTG ATGCCGAAGC CGCCATGGCG CATCCCGGCG ACAACATCGG ACAGACCGGC 
CTGCGCGCCA GTGTAGGCTG GCAGTTCAAC GACCAGTGGC ATGCCCGCAT GGCCGCCGCA 
CGCAACGATG CCGAAGCCTC CATGCAGGCG CGCATTTCGG GCATCACCGC CGACAGTGTG 
GCGCTGGCCC TGGACTACAC CCGGGACGAA CGCATGCACT GGCGGCTGGG CGGCAGTCAG 
TTCCGCTACG ACGACGGCAA CCGCCGCGAC ACCATCAGCA GCGCCATAGA GCAGCGGCTA 
CTGAGCCAGC CACGCCTGCT CATCGATGGC CTGGGCAGCG TCTACGCCAG CCGCGGCAGT 
CGCGATGATG CGCCCTATTT CAACCCTTCG CATGACCGCT CGATGGAGCT CGGTCTGCGC 
ATCAACCAGC AGCTATGGCG CCACTACGAA CGCGGCTTCC GCCAGCGCCT GACCGTCTCG 
GTGGGAGACT ACTGGCAGCA GCGGTACGGC AGCTCGCTGA TTCCCAGCGT GGCCTATCGC 
CACGAATGGC AGCTCGGCCA GGGCCGGACA TTTGAATACG GTGCGAGTTG GTCACGTCCG 
GTCTATGACG GCCGGCGCGA ACGTCATCTC GGCGTCGATG CCGCAATGCA CTGGGGAGAG 
TGA 

 

Protein sequence

MTVRKFPLAV CVCLTCATVT PGGHAATSSL GASRADQLAE ISRYRDQARW VDALAAIERA 
QSEQSDDTLL YKLQTLTLSD IGNAWLAWQL CKARPDLFDQ DQKAHLESNY LAKLVNWSLA 
YGESEDTRLT EAEDALAQME QYVQRKARPP AQVPLRIRMD RLILLNRLGR HSQVRDEANA 
LQREGHPLPD YVLPAVSDSM MATRQPAEAI PLLKTVLKNE PGRSQSRSQL VYAYLETEQA 
EKAIDYLQSW KKDEPAWRWG GGKSRYANWA RYEADLNMAM IHAYSGDLPT AQRALEGLLA 
VGPGNGGLQT ALGSVYQMRG WPRRALERHQ MAYTLDPRDV SPRIGMYESY IQLQRDDLAR 
PLHDSLLARY PNQPSVLHMD RDWRAHRGWQ LQAAAEGSHS SSGGGNSPLG NNDQHYSMEA 
DSPILDDRWR LFASADRRSV TFQNRYIAPL WLSGGVRYRF GHIDAEAAMA HPGDNIGQTG 
LRASVGWQFN DQWHARMAAA RNDAEASMQA RISGITADSV ALALDYTRDE RMHWRLGGSQ 
FRYDDGNRRD TISSAIEQRL LSQPRLLIDG LGSVYASRGS RDDAPYFNPS HDRSMELGLR 
INQQLWRHYE RGFRQRLTVS VGDYWQQRYG SSLIPSVAYR HEWQLGQGRT FEYGASWSRP 
VYDGRRERHL GVDAAMHWGE