| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04322 |
|---|
| Symbol | lacI |
|---|
| ID | 6304471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 963981 |
|---|
| End bp | 965048 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642638248 |
|---|
| Product | transcriptional regulator LacI family |
|---|
| Protein accession | YP_001912130 |
|---|
| Protein GI | 188575201 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGC CTACCATCAA AGATGTCGCC GAACGCGCCA AGGTCTCGTT GAAGACCGTG
TCGCGGGTGA TCAACAACGA GCCGTCAGTG ATGCAGGCCA CGCGTGCGCG GGTGCTACGC
GCCATTGCCG ATCTCGACTA CGAACCCGAC CCGTCCGCGC GCAATCTGCG CAGCGGCACG
CCGTTCGTGA TCGGGGTGGT CTACGACAAC CCCAACCCGT ACCACATCAT CGGCATCCAG
AACGGCGTGC TGGCTGCGTG CCGTGAAACC GGTTTTGGCT TGCAGATCCA CCCCTGCGAT
TCGACCTCGC CGTTGCTGGC CGAAGAACTG GCCGAATGGG TGCAGCGCTC GCGTCTGGCC
GGTGTGGTGC TGACCGCACC GATCTCCGAA CGCCCGGAGT TGCTGGCCGG TCTGGCGGCG
CGCGGTATCA AGAGCGTACG CATCATCGCC GCCACCGATG ACCCGGGCAA TGGCCCGTGC
GTGTATATCG ACGACCGCGA TGCCGCGTAT GAAATCACCG AGCATCTGAT CCAGCTCGGC
CATCAACGCA TCGGCTTCTT GTGGGGTGGT CCGCAGCATC GTTCCAGCGG CGAGCGCTAT
GCCGGCTACG AAGCGGCGTT GAAGGACTAT GGCATTGCGC TGGACAAGCA CCTGGTCATT
CCCGGCGATT ACACCTTCGA CGATGGCTTC CGTGGTGCAC GTCGCTTGCT GTCGCTGCGC
GAGCCACCCA CCGCCATCTT CGGCAGCAAC GACGAAATCG CCGCCGGCGT GTTGGCCGCA
GCCAGATCCA CCAGCATGAA CGTCCCGTAC GACTTGTCGA TTGCCGGGTT CGAAGACAGC
CCGTTTTCGC GCCAGTCGTG GCCGGCATTG ACCACAGCCA AGCAGGCCAC CGACGACATC
GCGCGGCATG CCGCACGCCT GTTGATCAGC CAGCTGCGCA GCGATGCCTA CGACGACCAG
CCCGCGCAAC TGCAGAACCG TGGCTTCGTG CCGCAACTGG TGGTGCGCGG CTCCACCGCG
CCGGCGCCTG CGTCCACCGG CAAACCCCTT CCCCCCGAAT CCGCCTGA
|
|---|
| Protein sequence | MRRPTIKDVA ERAKVSLKTV SRVINNEPSV MQATRARVLR AIADLDYEPD PSARNLRSGT
PFVIGVVYDN PNPYHIIGIQ NGVLAACRET GFGLQIHPCD STSPLLAEEL AEWVQRSRLA
GVVLTAPISE RPELLAGLAA RGIKSVRIIA ATDDPGNGPC VYIDDRDAAY EITEHLIQLG
HQRIGFLWGG PQHRSSGERY AGYEAALKDY GIALDKHLVI PGDYTFDDGF RGARRLLSLR
EPPTAIFGSN DEIAAGVLAA ARSTSMNVPY DLSIAGFEDS PFSRQSWPAL TTAKQATDDI
ARHAARLLIS QLRSDAYDDQ PAQLQNRGFV PQLVVRGSTA PAPASTGKPL PPESA
|
|---|
| |