| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04315 |
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| Symbol | |
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| ID | 6304464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 952350 |
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| End bp | 954866 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642638242 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001912124 |
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| Protein GI | 188575195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACA AGCGCGACGA CGTGTGCATG ACCGACGGCA TCTCTGCGCA GGACATCGGC
AAGTTTCCTG CCGAGAACAT CGCCGAGGCG ATCCAGCGCA TTCCCGGCGT ACAGATCTCC
ACCATCAACG GGCGCGGTTC CACGATCAGC GTGCGCGGCC TGGGCCCGCA GTATTCGGCC
ACCACCATCA ACGGCCAGGT GATCAAGAGC GCCGATTTCA CCGATGGCTT CCGCTACGAC
ATCATCCAGC CAGAGGTGGC CGCCGGAATC GAGGTGATCA AATCGCCGTC GGCGGACATG
GATGCCGGTG GCCTGTCGGG CACGGTCAAC ATCAACACCA CCAAACCCCT GGACTACCAG
CAGACCAAGC TGTTGTTTTC GGCCAAGACG CAGCCCTCCG AATTTGCCGG CAGTTCGCCC
ACGCCCAAGG GGGTGCTGAC CTATATCGAC CAGTTCCAGT TCGGTGGCGG CGATCTTGGC
GTGTTTCTCG GTGCCGGCTA TCAGAAGCTC AAGGATCGCG CCGATTATCT GTGGATCGAC
CGTTGGTATA CGCAGGCCAC CGACGCCGGC ACGTTGTATA TCCCGCGCCG TCCGCGCTAT
CGCTCGATCG AGCGCGAGAC CACGCGCAAG ATGTTCAATG GCGGGGTGCA ATGGAAGCCT
GGCGAGCAGC TGGACATGAA CCTTACTGCG CTGTATTCGC AGGACAGAAC CGCCAACGAC
ATGAACCAGC TGGTGTACTC GTTCGAGCGC AGTCCGCTGA CAGTGCTGCA GACCAACGGG
CTGACCGCCA CACAGGTATC GGCGTCGGAT TACTGGCTGG AAAACAATCA CCAGATCGAA
CAGCACAATC TGTCCACCCA GCTGCTCACC TACGACTTCA AGTGGAAGGG CGATGCCTGG
ACGCTGCGTG GCGCGGCCAA TGACACCCAG GGCAAGACCG ACGAGAACGA GCGTGCCGCG
ATCCTGGGCC GGATTCCCTC GGCAACGCTG CTGGATACCT TCAATCCCGA TGCGGTCTCG
CTGACCACCG ATGCCGACGC CAACGACGCC AGTGCCTGGA ACACGGCCAA TCTGGTGCGT
AGCGAATATC CCAACGGCTC CATCCAATCG CTCAGCAACA AGGAATGGTC GCTGCAGCTG
GATGCCGAAC GGTATCTGGA TCTGGGCGCG TTGAACGCGG TGCGCTTCGG TGCCAAATAC
CGTCGGGAAA CCTTTGATCG CGACGTGCGC CGGCGCGATT TTCTGTATCT GCTCAGAACC
GGTGCGGTGT CCGGCTTCGA CATGTTCCCG GAACTGTCTG CCGCCAGCAG CACGGTCAGC
AATTTCCTCG ACGGACAACT GGCCTCTCAG GATAGCTGGG TCACCCCGGA TGTCGCGGCT
TATGCGCGCT CGCTGGCGGC GGCGGGCATC ACCGTGCAGG TGCTGTTCGC ACCGCAGAGC
AGCTACAGCA TCGAGAACGA TATTTCTTCT GCGTATGCGA TGGCGCGCAT CGACACCGAC
ATCGGCAGCA TGCGTTTGCG CGGCAACGTC GGCATGCGCT ATGAAAATAC CAGGCGCACC
ACCGACACCT ACCTGACGCA GGCGCAAGCT GCCAGCGCCG ACGCCAATCT CGTGGTCGGC
ACCGCGCGCG CACCGTACGC GTATTCCAAC TGGTTGCCCA GACTGAATCT GGTGCTGGAC
ATGCGTGAAG ACTTGCTGCT GCGCTTTGCG GCCGCCAAGG TCCTGGTGCG GCCGATTCTG
GACAGCAACA CCGCCATCGC CTCAACGATT TCCACCGGCA CCAATACCGC CGGCACTACC
ACCTATGGGG TGGCCCAGGG CCAGACCGAT CTGAAGGCGC TGACCGCCGA TCAGGCCGAC
CTGAGCCTGG AGTGGTATTA CGGCAACGGC GGCGCGTTGA CCGTGGCCGG GTTCTGGAAA
AACATCAAGA ACGGCACCTT CAACAGCATC GTCTGCCCGG CCGCCTTCAA CGGCACCGCG
CTATCCAGCA ATGCAGCCGG CGACTGTGTG AGCGGTAACG GCGATATTTA CGAGATCACC
GCCACCACCA ACGATCCGAG CAAGGTCAAG ATTCGTGGTT ACGAGCTCGG CTGGACGCAA
TCGCTGGATG CCTGGTTGCC GATCGATGGC TTCGGGTTCA CCACCAATTT CACCCGGGTG
ATTCCGCAGC GCGATACCGA TTTCAAGATC CGCAACCTGT CCGAACAGAC CTGGAACGCC
ACCGCGTATT GGGAAAGCGA GCATGACTCG GCACGCGTGT CGCTCAATCA TCGCAGCGAG
TACGAGCAGG ACAGCAGCGA CAGCTTCTTC GCACGCGAAG GCCACATCAT GAAGGCGCGT
ACGCAGCTGG ATGCGGTACT CGGCTACCAG GTCAACGACA AGCTGAGTGT CCAGTTGGGC
GGCTTGAACC TCACCAACCG AAAAGAACAA GCGTACAAGG ACATCCCCAG CCGCTGGCAG
ATGACCGGCG TCACCGGTCG CAGCTATTAC CTGTCGATGC AATGGGACAT GCTTTGA
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| Protein sequence | MDNKRDDVCM TDGISAQDIG KFPAENIAEA IQRIPGVQIS TINGRGSTIS VRGLGPQYSA
TTINGQVIKS ADFTDGFRYD IIQPEVAAGI EVIKSPSADM DAGGLSGTVN INTTKPLDYQ
QTKLLFSAKT QPSEFAGSSP TPKGVLTYID QFQFGGGDLG VFLGAGYQKL KDRADYLWID
RWYTQATDAG TLYIPRRPRY RSIERETTRK MFNGGVQWKP GEQLDMNLTA LYSQDRTAND
MNQLVYSFER SPLTVLQTNG LTATQVSASD YWLENNHQIE QHNLSTQLLT YDFKWKGDAW
TLRGAANDTQ GKTDENERAA ILGRIPSATL LDTFNPDAVS LTTDADANDA SAWNTANLVR
SEYPNGSIQS LSNKEWSLQL DAERYLDLGA LNAVRFGAKY RRETFDRDVR RRDFLYLLRT
GAVSGFDMFP ELSAASSTVS NFLDGQLASQ DSWVTPDVAA YARSLAAAGI TVQVLFAPQS
SYSIENDISS AYAMARIDTD IGSMRLRGNV GMRYENTRRT TDTYLTQAQA ASADANLVVG
TARAPYAYSN WLPRLNLVLD MREDLLLRFA AAKVLVRPIL DSNTAIASTI STGTNTAGTT
TYGVAQGQTD LKALTADQAD LSLEWYYGNG GALTVAGFWK NIKNGTFNSI VCPAAFNGTA
LSSNAAGDCV SGNGDIYEIT ATTNDPSKVK IRGYELGWTQ SLDAWLPIDG FGFTTNFTRV
IPQRDTDFKI RNLSEQTWNA TAYWESEHDS ARVSLNHRSE YEQDSSDSFF AREGHIMKAR
TQLDAVLGYQ VNDKLSVQLG GLNLTNRKEQ AYKDIPSRWQ MTGVTGRSYY LSMQWDML
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