| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04259 |
|---|
| Symbol | |
|---|
| ID | 6304422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 907499 |
|---|
| End bp | 909559 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642638200 |
|---|
| Product | penicillin-binding protein 2 |
|---|
| Protein accession | YP_001912082 |
|---|
| Protein GI | 188575153 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.209813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGGC ACCGTCATCC CAAGAATCCG CATGCCGAGG CCGAACAGTT CCGCCGCCGT
GCGGTGCTGG GCTTTGCGAT GGTGCTGATC TGCCTGGTCG GCCTGGGCGG TTGGTACTTC
AAGTTGCAGG TGCTCGATCA CGAGGTGTAT GCCACGCGCT CGGAGGCCAA TCGCATCAAG
CCCAAGCCGG TAGTGCCCGG GCGCGGCATG ATCTACGACC GCACCGGCCG GCTGCTGGCC
GAAAACGTGC CGGCCTTCCG CCTGGACGTG ACCCCCGACA AGGTCACCGA CATGAGCGCT
ATGCTGGACG CGCTCGGCAA CGTCATCCCG ATCTCGCCGG AGGACTTGGA GCGCTTCAAC
CGCGAGCGGC ACGCACGACG CAGCTTCCTG CCAGTGACGC TCAAGCTGCG CATGAGCGAT
GAAGAGATGG CGCGGTTTGC GGTGGAGCGC TGGCGCTTCC CCGGCGTGGA GCTGGAGCCG
TATCTGACCC GCCGTTATCC CTATGGTCCG TTGTTCGCGC ACATCATCGG CTATGTGGGC
CGTATCGATG AAAAAGACCT GGCGGTGCTG GGCGAGGGCA ATGCCGCGCT GACCCACATG
GGCAAATCCG GGCTGGAGCG CTATTACGAG CAGGATCTGC GCGGGCAGGT CGGTTACGAG
CAGGTCGAAA CCAATGTGCA GGGGCGGGCG ATCCGCACCG TTGGCCGGGT CGCGCCGCAA
TCGGGTGCGG ACCTGCGCCT GTCGGTAGAC GCCGATCTGC AGCGCGCAAT GGTGGCGGCA
TTCGGCGAGC ACGAAGGCGC GGCCATCGCA ATGGACCCGC GCACCGGCGA GATCCTGGGC
ATGGTCAGCC TGCCCAGCTA CGACCCCAAT CTGTTCGTCA ACGGCATCTC GCATACCGAT
TTCAAGATGC TCAACGACAA CCCGTCGCGG CCGCAGTTCA ATCGCCTGGT GCTGGGCGGC
GTGGCGCCGG GCTCCACGCT CAAGCCGCTG ATCGCGCTGG CTGGCCTGGA CAGCGGCGTG
CGCCGGCCGG AAGACCGGGT GTTGTCCACC GGCATGTTCT ACCTGCCCGG CGTGAGCCGC
GGCTGGGGCG ATTCGCACCG CGGCGGGCAT GGCTGGACCG ACCTGCGCAA ATCCATCGCC
CAGTCGGTCA ATACCTATTA CTACCGCCTG GCGGTGGATA TGGGCATCGA GCGCTTCGAC
CACTACCTGG GCGAATACGG CTTCGGCCAG CCCACCGGTG TGGATCTGCT GGGCGAAATC
GGCGGCATCC TGCCGTCGCC GGCCTACAAG TACAAGACCC GCAAGGAGCG CTGGTATCCC
GGCGACACGG TCAATATCGC GATTGGTCAG GGCGACTGGA AGGTGACGCC GCTGCAGCTG
GTGCGCGGCG TCTCGGCGAT CGCCAGTGGC CTGCTGCTGC GCCCGCATCT GGTGCTGGAA
GAACGCACCG GCTTCGATCA CCCGTGGGAA CCGATGATCC AGCCGCCGGG CAAGCCGATC
AGCCCGAATC CGGCGCATCT GCAGGTAGTG CGCGAAGGCA TGATGGACAC CATGCGGCCC
GGCGGCACCG GCTATGCCAT CACGCCCGGT GCGCCGTACC AGATGGCCGG CAAGACCGGT
ACCGCGCAGG TGGTCAGCCG CAAGGGCGTG GCGGCGGTGG ACCCACGCAG CTTGCCGTTG
CACTTGCGCC ACCGCGGTCT GTTCGTCGGC TTTGCGCCGG CCGATCACCC GGTCATCGCG
GTGGCAGTGG CGGTGGAGGG GGGCGGCTTC GGTACCAGCT CGGCGGCGCC GATTGCGCGC
AAGATCTTCG ATGCCTGGCT GCTGGGCAAG ATGCCCGCCG GCCTGGAGCC GTTGGACAGC
GAGCTCGGCA TGACCGCCGT AGGCGTCAAT CGGTTCGAAG CCGGCGTCAC CGATGCGCGC
GCAGCCGGCG ATGCGGCAGC CGCCACGCTG GACGAGCTGC CGGTGGTGGT CGGACAGACC
GCCGTTGCGC TGGACCCCAA CACGCCCGCG CAACCGGTGG TGCCGGATGT GCCGGACGCG
GTGCAGGAGA CCGACCATTG A
|
|---|
| Protein sequence | MHGHRHPKNP HAEAEQFRRR AVLGFAMVLI CLVGLGGWYF KLQVLDHEVY ATRSEANRIK
PKPVVPGRGM IYDRTGRLLA ENVPAFRLDV TPDKVTDMSA MLDALGNVIP ISPEDLERFN
RERHARRSFL PVTLKLRMSD EEMARFAVER WRFPGVELEP YLTRRYPYGP LFAHIIGYVG
RIDEKDLAVL GEGNAALTHM GKSGLERYYE QDLRGQVGYE QVETNVQGRA IRTVGRVAPQ
SGADLRLSVD ADLQRAMVAA FGEHEGAAIA MDPRTGEILG MVSLPSYDPN LFVNGISHTD
FKMLNDNPSR PQFNRLVLGG VAPGSTLKPL IALAGLDSGV RRPEDRVLST GMFYLPGVSR
GWGDSHRGGH GWTDLRKSIA QSVNTYYYRL AVDMGIERFD HYLGEYGFGQ PTGVDLLGEI
GGILPSPAYK YKTRKERWYP GDTVNIAIGQ GDWKVTPLQL VRGVSAIASG LLLRPHLVLE
ERTGFDHPWE PMIQPPGKPI SPNPAHLQVV REGMMDTMRP GGTGYAITPG APYQMAGKTG
TAQVVSRKGV AAVDPRSLPL HLRHRGLFVG FAPADHPVIA VAVAVEGGGF GTSSAAPIAR
KIFDAWLLGK MPAGLEPLDS ELGMTAVGVN RFEAGVTDAR AAGDAAAATL DELPVVVGQT
AVALDPNTPA QPVVPDVPDA VQETDH
|
|---|
| |