| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04252 |
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| Symbol | lysM |
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| ID | 6304428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 917232 |
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| End bp | 918506 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642638206 |
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| Product | LysM domain protein |
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| Protein accession | YP_001912088 |
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| Protein GI | 188575159 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATC TTGCCCTATA CAAAATTAAG AGCGGCGATT CACTTGATAG CATTGCAAGG
CAACATGGGA CTTCTGTAGA AGAAATATCC AAACTTAACA ATATCAAGAA TCCGAATATT
ATTCGCACAG GCCAACAGCT AAAAATGCCT AATAAAAAGG CATGGTCATT GGCAAGCCAG
GAAACAAAAC CTCAATCTCC CCCGCCAACT TCAGTTCAAT TTGTTTTGCT GGATCGATTA
TTGAATGCAA TTGGCGACTT AAACTATCAA ATAATCCACA AAGAGACCGG AAGGAAGATA
AATGGCAAGA CCACAGAGTA TGGTCTGACA GAGGTAATTA CCGGAAATAT AAATGACACG
ATCGAGTTGT GCGTCGCACG CGCAGGAGGA GGTTTCAAAA AGATATATGA GACCTATATT
GCCGCCTCGC GAAAAATAGT TACTGCTCAA AGTCCGTCAA TTAGATTCAA AGCCAAAACT
GATAGGCATG ATGGCGCATC AGAAGCTGGC GAAAAAATTG GCAGAGATAA GAATGGACAC
CCTCTGATTG TTATTGATAA ACAGGATGTT GAGCTAGACT TTCTTGACCG CTACACTGGG
GCGAAGCTTT CCGATCAAGA TATCCAAGAC GCAGCCAAAG AACTCAGATG CGAGCCGGGC
CTGATTTTTG CTATCGCAAC ACAAGAGTCG TCTCAATCCT CATTTATTGA TTTGGATGGG
AATAAAATCC CTGCAATTCT TTATGAGCGA CATTGGTTTA GAAAACTTAC AAATCCTAGC
AAGAAGCAGC CTAGTCCTTA CGAAGCCACG CACCCCAATA TTTGCGGCCC CGCGTACAAA
CGAGCCAAAA AAAATAAGAA AGGCGAGTAT GTGGAAAAGA AGACGGGTAA TATCGTTCAA
GAAGATGACA TATATGGCTC GCCCGGTATT CACCAATACA AGAGGCTGCT TATAGCCTAC
AAGCTAAACC AAGAGGCAGC ATTGCAATCT TGCTCTTGGG GTAAATTTCA GATCATGGGG
TTCAATTATA AGGTCGCTGG CTTTGCATCA GTTAAAGAAT TTACCAAGGC CATGTCTTTG
AGTGACGCGG AACACATGAA AGCATTTTTA AAATTTGCAA AATCAAACCC AACTCTTCTT
GAGGGCCTTC AAAATAAAGA CTACGAAAAG ATTGCAGAAG GCCACAATGG TGGTAGCTGG
AGACATATCA ATCCAGATTA TGCAACCAAT ATCGAGAAAT ATTACAATGA CTACACGCGC
ACAAGCAAAA AATAG
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| Protein sequence | MNDLALYKIK SGDSLDSIAR QHGTSVEEIS KLNNIKNPNI IRTGQQLKMP NKKAWSLASQ
ETKPQSPPPT SVQFVLLDRL LNAIGDLNYQ IIHKETGRKI NGKTTEYGLT EVITGNINDT
IELCVARAGG GFKKIYETYI AASRKIVTAQ SPSIRFKAKT DRHDGASEAG EKIGRDKNGH
PLIVIDKQDV ELDFLDRYTG AKLSDQDIQD AAKELRCEPG LIFAIATQES SQSSFIDLDG
NKIPAILYER HWFRKLTNPS KKQPSPYEAT HPNICGPAYK RAKKNKKGEY VEKKTGNIVQ
EDDIYGSPGI HQYKRLLIAY KLNQEAALQS CSWGKFQIMG FNYKVAGFAS VKEFTKAMSL
SDAEHMKAFL KFAKSNPTLL EGLQNKDYEK IAEGHNGGSW RHINPDYATN IEKYYNDYTR
TSKK
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