Gene PXO_04245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04245 
Symbol 
ID6304276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp768430 
End bp769236 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID642638054 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001911936 
Protein GI188575007 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCCCA GCTTCCCTTT CTCCTCATCG GCCTGGCTGC GTGCAGCCGT CTGCCTGGTC 
GCGCTGTCGC TGGGCGCCTG TGCGCACGCA CCGGAGCGCA ACCCGCTGGC GCGGTGGGTG
CCCTCGCCCA ATAACGATAT GCGGCGACCG ATCCTGATCG TGTTGCATTT CACCGAACAA
CATTCAGTGC AGCAAAGCGT GAGCACGCTG CGCGGCCGCA ACAGCGGTGG TTGGGTCAGT
GCGCACTATC TGATTGGCAA GGATGGGCAG CGCTACCAGT TGGTCAGCGA TGCCCAGCGC
GCCTGGCACG GCGGTGCCGG CCGCTGGGGC ACCATCACCG ACATCAATTC GGCCTCGATC
GGTATCGAGC TGGACAACGA CGGTAGCGAG CCGTTCGCGC CGGCACAGAT CGACAGCCTG
CTGGTGTTGC TGGACGACCT GTGTAACCGC CTGCGTATCC CGCGCACGCA GATAGTTGGC
CACGAAGATG TTGCCCCGAC GCGCAGGAAC GACCCCGGCC CGTTATTTCC CTGGAAGCGC
CTGGCCGAAG CCGGCTTCGG CCGCTGGCCC GCTGCCGATG CGCCCGCAGC CCCGGCAAGT
TTCGACCCAT GGCAGGCGCT TGCCATGATC GGCTACAGCA TCGACGATCC AGCCGCCACC
CTGCAGGCGT TTCACCATCA CTACCGCGGC CACAGCGCCA CCACGCTGGA TGCCGAGGAT
CTGCGCATCT TGTCTGCGTT GACCAAAGGC GCGAGAACTT CTAGCCCGCG ACCGGCGCTT
GAGCCAATCG AAGGCGACAA CCGCTAG
 
Protein sequence
MLPSFPFSSS AWLRAAVCLV ALSLGACAHA PERNPLARWV PSPNNDMRRP ILIVLHFTEQ 
HSVQQSVSTL RGRNSGGWVS AHYLIGKDGQ RYQLVSDAQR AWHGGAGRWG TITDINSASI
GIELDNDGSE PFAPAQIDSL LVLLDDLCNR LRIPRTQIVG HEDVAPTRRN DPGPLFPWKR
LAEAGFGRWP AADAPAAPAS FDPWQALAMI GYSIDDPAAT LQAFHHHYRG HSATTLDAED
LRILSALTKG ARTSSPRPAL EPIEGDNR