Gene PXO_04244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04244 
Symbol 
ID6304277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp769329 
End bp770075 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID642638055 
ProductD-alanyl-D-alanine dipeptidase 
Protein accessionYP_001911937 
Protein GI188575008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA CCCTGCTATT TCGGAAAGGG CGCTGCTGGC GGCAGCTTTT TCTTCAAGGC 
GCTCTGCTGA TGATCGCCAT GGCGCCATCC GCCCTGGTCG CCAGCGACGT GCATGTGTCC
TCGGCAAAGA CCGCCGCAGA GGCCGGCCTT GTGGACGTAC ACGCCCTTGC GCCGGACATT
GCGTTGGACA TGCGTCATGC AAGCAGCAAC AACTTCACCG GGCAGGTCGT GCCGGGATGT
AACGCGCCGC GGTGTTATCT GCTGCAGCCA GCTGCCGAAG CGTTGGCGCG GGTGGCGCAT
ACGCTTGAGG CCGAAGGGGA CAGATTGCAA GTGTCCGACT GCTATCGGCC GGTGCGGTCT
GTGAAAGCAT TCGTGGCCTG GGCGGCGGAT CTGCAAAATC AGACGACCAG GGCGCAGTAC
TACCCGCGGG TGGACAAGCG TGCGCTGCTG GGCGATTACA TTTCTCCGAC CTCCGGGCAT
CGCCGTGGCG CGACCCTGGA TCTGGGTTTG CTGCAGTGCC GGTCGGCTGC GTGCCAGGCA
GTGGACATGG GCACCGGTTT CGATGTCTTC GATGCGCGTG CGCACACCGA TGCGCCAGAC
ATCAGCGCAG GGCAACGCGC ACACCGCCAG CGCCTGCTGC GTGCGATGGC GGCCGAAGGA
TTTGCCAACT ATCCGATGGA GTGGTGGCAT TTCACGTTTC GTCCCGAGCC CACGCCTGAT
ACGGCCTACG CTGTTTCGGT GGACTGA
 
Protein sequence
MKETLLFRKG RCWRQLFLQG ALLMIAMAPS ALVASDVHVS SAKTAAEAGL VDVHALAPDI 
ALDMRHASSN NFTGQVVPGC NAPRCYLLQP AAEALARVAH TLEAEGDRLQ VSDCYRPVRS
VKAFVAWAAD LQNQTTRAQY YPRVDKRALL GDYISPTSGH RRGATLDLGL LQCRSAACQA
VDMGTGFDVF DARAHTDAPD ISAGQRAHRQ RLLRAMAAEG FANYPMEWWH FTFRPEPTPD
TAYAVSVD