| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04234 |
|---|
| Symbol | |
|---|
| ID | 6304286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 775472 |
|---|
| End bp | 776281 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642638064 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_001911946 |
|---|
| Protein GI | 188575017 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGT CCTACCTTAT CAACATGCAG CGCAGTAGCG ACCGGTTGCA GGCCATGTCG
GCGCGCTTCG ATGCGCTGGG CCTGCCGTTC GAGCGCATTG CAGCTGTGGA TGGCGCCACG
TTGACGGACG AGCAGATCGC CGATTTCGTA CGTGAGCGCC CACTGGAAGG GTCGGGCGAT
GCCTTCAGCA CCGGCCCGCG CAAGTGGACC GCATCCAACA TCGGCTGCTT TCTCAGTCAT
CAGGCGGCAT GGCGCATCGC GACCGACTCC GCTGACGCTT ACACCGCGAT TTTCGAAGAC
GACATGCATC TGTCCGATAC GCTGCCGGCG CTGCTGGCCA GCACGGATTG GCTGCCAGGC
GGCAACAGCA TCGTGCGCCT GGAGCCGTCC TACAACCGCA TCAAGCTCGA TGCCAAGGTT
GCCGACGTCG CCGGGCGTCA ACTGCGCCCG GTGCGCCCAT CAACGTATCA ACATTGCTGG
CCGGTGTGCG CGGGTGCGTT GATCGTCAGC AGGGATGCCG CGCGATTGCT GCTGGCTGCG
CAGGCGCGCT GGCACACCAT GGCCGATATT TTTTTGTTCG GTTGGAACGA GTCGCCAGTG
GCGCACCAAC TGTCCACGTA TCAGCTCTCG CCAGCGGCTT GTATCCAGGA CAAGTTCTTC
CATGCGACTG CGGAAGACAT CGTGTTCACC AGCACGATCG ATGCGCCGCT GACGCAAGCG
CAAAAGCGGC GCAGCACGCA GTGGAAAGCA AAGGCCACCG CGTTGCTGCG GGTGGCGCAG
GGCTATCGCA AGGTTGTGTT TGCGCCTTAG
|
|---|
| Protein sequence | MIKSYLINMQ RSSDRLQAMS ARFDALGLPF ERIAAVDGAT LTDEQIADFV RERPLEGSGD
AFSTGPRKWT ASNIGCFLSH QAAWRIATDS ADAYTAIFED DMHLSDTLPA LLASTDWLPG
GNSIVRLEPS YNRIKLDAKV ADVAGRQLRP VRPSTYQHCW PVCAGALIVS RDAARLLLAA
QARWHTMADI FLFGWNESPV AHQLSTYQLS PAACIQDKFF HATAEDIVFT STIDAPLTQA
QKRRSTQWKA KATALLRVAQ GYRKVVFAP
|
|---|
| |