Gene PXO_04225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04225 
Symbol 
ID6304296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp783537 
End bp784046 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID642638074 
Product2-oxoacid dehydrogenase E1 component, beta subunit 
Protein accessionYP_001911956 
Protein GI188575027 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0435645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGGCCG CGATCCGCGA CCCGGATCCG GTGATCTACA TGGAGCCCAA GCCCATCTAT 
CGCCAGTACA AGGAAGTGGT GGCCAACGAT GGGCAAGCGC TGCCGCTGGA TGTGTGCTTC 
GTGCTGCGCG ACGGCACCGA TGTCACCCTG GTGACCTGGG GCGCGCAGGT CAAGGAAGCG 
CTGGAAGCGG CCGACACACT CGCCGGCGAA GGCATCAGTG CCGAAGTCAT CGACGTGGCC 
ACGCTGCGCC CGCTGGACTT CGACACCATT GCCGAATCGG TTGCCAAGAC CGGCCGCTGC 
GTGATCGTGC AGGAAGCCCC GCGCACTGCC GGTTTCGGCG CGGAAATCGC CGCACGTCTG 
GCCGAACAAT CGATGTACGA CCTGGTGGCG CCGGTCGAAC GCGTCACCGG TTACGACACG 
CATATCCCGC TGTTCCGGCT GGAAATGAAG TACCTGCCGA GCGTGGAGCG CATCGTGACC 
GCGGCACGTC GCGCGGTGGC TGCCGGCTGA
 
Protein sequence
MLAAIRDPDP VIYMEPKPIY RQYKEVVAND GQALPLDVCF VLRDGTDVTL VTWGAQVKEA 
LEAADTLAGE GISAEVIDVA TLRPLDFDTI AESVAKTGRC VIVQEAPRTA GFGAEIAARL 
AEQSMYDLVA PVERVTGYDT HIPLFRLEMK YLPSVERIVT AARRAVAAG