Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04219 |
Symbol | |
ID | 6304302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 789036 |
End bp | 790544 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642638080 |
Product | di-tripeptide transporter |
Protein accession | YP_001911962 |
Protein GI | 188575033 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.189754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTG ACGCGACCGC GCCGATATCC GCTTCCACTC CGCCGCCGCC CGAATTCCCC ACGTTGCTTG GCCACCCCCG GCCGCTGTGG ATGCTGTTCA TGACCGAGTT CTGGGAACGC TTTGCGTTCT ACGGCATTCG CTGGGCGCTG ACGCTCTATA TCGTGGCCGA GTTCTACCAG GGCTCTGGTG TCGGCGAGGC GCCGGCCAAC CGGCTCTACG GCGCCTATCT GGCGCTGGTC TACGCCTCGG CATTGTTTGG GGGCTTCGTC GCAGATCGAT TGATCGGCTA CCAACGCTCG CTGTTGATCG GTGCAGTGGT CATGTCGGCT GGCCTGTTCC TGATCGTGGT ACCGAACGAC CAAGTGTTCA AGATCGGTCT GGCGACGATC ATCGCAGGTA ACGGCTTGTT CAAGCCGAAT GTCTCGACGA TGGTCGGTCA GCTGTATCCG CTGAATGACC CGCGCCGGGA TTCAGGATTC ACGATTTTCT ACATGGGCAT CAATGCGGGC GGCTTCGTTG CGCCTATCCT GACCGGCCTG CTTGCCGACA AGTTGTTCGG CACTGAAGCG ATGCCGGCTT ACAAGTACGT GTTCATCGCA TCCGGCATCG GCATGTTGAT CAGTCTGGTC TGGTTCTGGC TGGGGCGTCG TCAACTCGGA CCGGTCGGTT TGCCGCCGGT TGGTGGAGAA GGCATGGGCC GAACGCTGGT GGTCTTGGTG GGCACGGTTG TGGCCGTTCC GGTCGCCTAT GGGCTGCTGC TGATCGGCGC CAGCATCCTT GGTTGGATCC TGACCATTTT GTTCCTTGCC CTGTGTGGAC TGATCCTGTT CGAAGGCATT CGTGAAGGCA AGGTACAACG CGATCGCGCG GTCGCCATGC TGATCGTCTT TGTATTCAAC GTCATGTTTT TCATGTTCTT CGAGCAGGCG GGCAGTTCGT TCAATTTCCT CGCCCAGAAC ATCGTGGAGC GCGACCTGGG CGGCTGGATG TTCCCGGTGG GCTGGTTTCA ATCGGTCAAT ACGCTGGCAA TTCTGGTGCT TGGCCCGGTC TTCGTATGGC TCTGGGTCGC GCTGAAATCG GCCAATCCGT CGATCCCGAG AAAGTTTGGC TTAGGACTGA TCTTCAACGG TCTGGCCTTT GCCCTGCTGA TGTACGCCTT GTCGGCCCTG ATCGACGATG CTGGCAAGAT TCCCTTCTGG ACGTTGTTCA TGGTCTATGT CATCCAGACC GTCGGCGAGC TGTGCCTGTC TCCCATCGGC TTGTCGATGA CGACCAAGCT GGCGCCTGCC AAAGTGGTCG GCCTGGCCAT GGGGGGCTGG TTCCTGTCGA CCGCGATCGG CAATAACCTG TCGGGCATTT TCGCTTCTGC GATCAGTGGC GAGACTGGCA TGACCGTGGC GTCTGCATTG AAGGGCTACA CTTTTGGTTT CTGGTCGTTG ATCGCTGCGG GTGTGTTGCT GCTGCTGATT GCCCCGTTGG TCAACAAACT GATGCACGGT GTGAAGTGA
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Protein sequence | MSVDATAPIS ASTPPPPEFP TLLGHPRPLW MLFMTEFWER FAFYGIRWAL TLYIVAEFYQ GSGVGEAPAN RLYGAYLALV YASALFGGFV ADRLIGYQRS LLIGAVVMSA GLFLIVVPND QVFKIGLATI IAGNGLFKPN VSTMVGQLYP LNDPRRDSGF TIFYMGINAG GFVAPILTGL LADKLFGTEA MPAYKYVFIA SGIGMLISLV WFWLGRRQLG PVGLPPVGGE GMGRTLVVLV GTVVAVPVAY GLLLIGASIL GWILTILFLA LCGLILFEGI REGKVQRDRA VAMLIVFVFN VMFFMFFEQA GSSFNFLAQN IVERDLGGWM FPVGWFQSVN TLAILVLGPV FVWLWVALKS ANPSIPRKFG LGLIFNGLAF ALLMYALSAL IDDAGKIPFW TLFMVYVIQT VGELCLSPIG LSMTTKLAPA KVVGLAMGGW FLSTAIGNNL SGIFASAISG ETGMTVASAL KGYTFGFWSL IAAGVLLLLI APLVNKLMHG VK
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