Gene PXO_04219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04219 
Symbol 
ID6304302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp789036 
End bp790544 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content59% 
IMG OID642638080 
Productdi-tripeptide transporter 
Protein accessionYP_001911962 
Protein GI188575033 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3104] Dipeptide/tripeptide permease 
TIGRFAM ID[TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.189754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTG ACGCGACCGC GCCGATATCC GCTTCCACTC CGCCGCCGCC CGAATTCCCC 
ACGTTGCTTG GCCACCCCCG GCCGCTGTGG ATGCTGTTCA TGACCGAGTT CTGGGAACGC
TTTGCGTTCT ACGGCATTCG CTGGGCGCTG ACGCTCTATA TCGTGGCCGA GTTCTACCAG
GGCTCTGGTG TCGGCGAGGC GCCGGCCAAC CGGCTCTACG GCGCCTATCT GGCGCTGGTC
TACGCCTCGG CATTGTTTGG GGGCTTCGTC GCAGATCGAT TGATCGGCTA CCAACGCTCG
CTGTTGATCG GTGCAGTGGT CATGTCGGCT GGCCTGTTCC TGATCGTGGT ACCGAACGAC
CAAGTGTTCA AGATCGGTCT GGCGACGATC ATCGCAGGTA ACGGCTTGTT CAAGCCGAAT
GTCTCGACGA TGGTCGGTCA GCTGTATCCG CTGAATGACC CGCGCCGGGA TTCAGGATTC
ACGATTTTCT ACATGGGCAT CAATGCGGGC GGCTTCGTTG CGCCTATCCT GACCGGCCTG
CTTGCCGACA AGTTGTTCGG CACTGAAGCG ATGCCGGCTT ACAAGTACGT GTTCATCGCA
TCCGGCATCG GCATGTTGAT CAGTCTGGTC TGGTTCTGGC TGGGGCGTCG TCAACTCGGA
CCGGTCGGTT TGCCGCCGGT TGGTGGAGAA GGCATGGGCC GAACGCTGGT GGTCTTGGTG
GGCACGGTTG TGGCCGTTCC GGTCGCCTAT GGGCTGCTGC TGATCGGCGC CAGCATCCTT
GGTTGGATCC TGACCATTTT GTTCCTTGCC CTGTGTGGAC TGATCCTGTT CGAAGGCATT
CGTGAAGGCA AGGTACAACG CGATCGCGCG GTCGCCATGC TGATCGTCTT TGTATTCAAC
GTCATGTTTT TCATGTTCTT CGAGCAGGCG GGCAGTTCGT TCAATTTCCT CGCCCAGAAC
ATCGTGGAGC GCGACCTGGG CGGCTGGATG TTCCCGGTGG GCTGGTTTCA ATCGGTCAAT
ACGCTGGCAA TTCTGGTGCT TGGCCCGGTC TTCGTATGGC TCTGGGTCGC GCTGAAATCG
GCCAATCCGT CGATCCCGAG AAAGTTTGGC TTAGGACTGA TCTTCAACGG TCTGGCCTTT
GCCCTGCTGA TGTACGCCTT GTCGGCCCTG ATCGACGATG CTGGCAAGAT TCCCTTCTGG
ACGTTGTTCA TGGTCTATGT CATCCAGACC GTCGGCGAGC TGTGCCTGTC TCCCATCGGC
TTGTCGATGA CGACCAAGCT GGCGCCTGCC AAAGTGGTCG GCCTGGCCAT GGGGGGCTGG
TTCCTGTCGA CCGCGATCGG CAATAACCTG TCGGGCATTT TCGCTTCTGC GATCAGTGGC
GAGACTGGCA TGACCGTGGC GTCTGCATTG AAGGGCTACA CTTTTGGTTT CTGGTCGTTG
ATCGCTGCGG GTGTGTTGCT GCTGCTGATT GCCCCGTTGG TCAACAAACT GATGCACGGT
GTGAAGTGA
 
Protein sequence
MSVDATAPIS ASTPPPPEFP TLLGHPRPLW MLFMTEFWER FAFYGIRWAL TLYIVAEFYQ 
GSGVGEAPAN RLYGAYLALV YASALFGGFV ADRLIGYQRS LLIGAVVMSA GLFLIVVPND
QVFKIGLATI IAGNGLFKPN VSTMVGQLYP LNDPRRDSGF TIFYMGINAG GFVAPILTGL
LADKLFGTEA MPAYKYVFIA SGIGMLISLV WFWLGRRQLG PVGLPPVGGE GMGRTLVVLV
GTVVAVPVAY GLLLIGASIL GWILTILFLA LCGLILFEGI REGKVQRDRA VAMLIVFVFN
VMFFMFFEQA GSSFNFLAQN IVERDLGGWM FPVGWFQSVN TLAILVLGPV FVWLWVALKS
ANPSIPRKFG LGLIFNGLAF ALLMYALSAL IDDAGKIPFW TLFMVYVIQT VGELCLSPIG
LSMTTKLAPA KVVGLAMGGW FLSTAIGNNL SGIFASAISG ETGMTVASAL KGYTFGFWSL
IAAGVLLLLI APLVNKLMHG VK