| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04198 |
|---|
| Symbol | rpe |
|---|
| ID | 6304324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 809545 |
|---|
| End bp | 810354 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638102 |
|---|
| Product | ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_001911984 |
|---|
| Protein GI | 188575055 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTGG TTGTACCGCA CCCGGCGATG CCAGCCGCCC AACTGTCAGG CCGTTTCCCG
CAGCGCCCGG TGGTGTTCGG CTTTCCTGGC CGGGCCGCGG TTGCGACAAT GGCGCTCCTG
CATTTTTCCG AGCTGCCCAT GCAACCGACG GCGATCGCCC CGTCCATTCT GTCTGCCGAT
TTCGCCCGTC TGGGCGAGGA AGTGAACAAC GTCCTCAAGG CCGGTGCCGA CTGGGTGCAC
TTCGACGTGA TGGACAACCA CTATGTGCCC AACCTCACCA TCGGTTCGAT GGTGTGCCAG
GCGCTGCGCA AGCACGGCAT CACCGCGCCG ATCGACGTGC ATCTGATGGT CGAGCCGGTG
GACCGCATCG TGCCGGATTT TGCCGACGCC GGTGCCACCA CCATCAGCTT CCATCCCGAA
GCCAGCCGTC ACGTGCACCG CACGATCCAG CTGATCAAGT CGCACGGCTG TCAGGCCGGG
CTGGTGCTCA ATCCGGCCAC GCCGGTGGAT ATCCTGGATT GGGTGCTGCC CGAGCTGGAT
CTGGTACTGG TGATGTCGGT CAACCCGGGC TTCGGCGGCC AGGCCTTCAT TCCTTCCGCG
CTGGATAAAT TGCGTGCGAT CCGCACGAAG ATCGATGCGC TGGGCAAGCC GATCCGGCTG
GAGATCGATG GCGGCGTCAA GGCCGACAAC ATCGGTGCCA TTGCCGCAGC CGGCGCCGAC
ACCTTCGTTG CTGGCTCCGC AATCTTCAAC GCGCCCGACT ATGCGCAGGT GATTGTACAG
ATGCGTGCGG CGGTGGAGGC GGTGCGATGA
|
|---|
| Protein sequence | MRLVVPHPAM PAAQLSGRFP QRPVVFGFPG RAAVATMALL HFSELPMQPT AIAPSILSAD
FARLGEEVNN VLKAGADWVH FDVMDNHYVP NLTIGSMVCQ ALRKHGITAP IDVHLMVEPV
DRIVPDFADA GATTISFHPE ASRHVHRTIQ LIKSHGCQAG LVLNPATPVD ILDWVLPELD
LVLVMSVNPG FGGQAFIPSA LDKLRAIRTK IDALGKPIRL EIDGGVKADN IGAIAAAGAD
TFVAGSAIFN APDYAQVIVQ MRAAVEAVR
|
|---|
| |