| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04186 |
|---|
| Symbol | |
|---|
| ID | 6304334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 821949 |
|---|
| End bp | 824261 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638112 |
|---|
| Product | dipeptidyl peptidase IV |
|---|
| Protein accession | YP_001911994 |
|---|
| Protein GI | 188575065 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.804182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTTGC GGCACCTGTT AGTCGCCATC GCCCTGGCCA CCCTGCCGGC ACTCGCCAGC
GCACAGACGC CTGCTGTTAC CGAGGCCGAC TACGCGCGCG CGGAGCGGCT GATCAGCTAC
GCCGCGCAGC CGCTGGTGGA CCACGCCGCC ACCCGCCTCC ACTGGCTGGA CGCCACGCAT
GTGGTGTATG TCGATCACGA CGCCAAGGGC AACCGCCTGC TGCAGCTGGA TACCAGCACC
GGCAAGACCG CACCGATCTT CAAACAGGCT GCGCTGGTCG CTTCGCTCAA CACGCTACTG
AAGACCGGCG ACAAATCGCT CAAGGCCGAC ACCTTCGCGC CGATGGTCAA GCTCACCGCC
GATGGTCGCT ACCGCCTCAA CGTGCGCGAT ACCGCCGTGG TCTGCGATGC GCGTGCGCGT
TGCAGCAAGC TGTACGCCAA GGACAAACCG GAACCTGGCG TGCTGTCGCC GGACAAGCGC
AGCGAGGCGT TCATTCGCGA CTGGAACCTG TGGGTGCGCG ATCTCGCCAG CGGCCAGGAA
ACCCAGCTCA CCCGCGATGG CGTGGAAAAC TTCGGCTACG CCACCGACAA CGCCGGCTGG
CAGCACACCG ATAACGCCAT CGTGGCCTGG TCGCCGGACT CCAGCAAGAT CGCCACCTTC
CAACAGGACC AGCGCAAGAC CGGCGACATG TACCTGGTCA GCACCAAGCT GGGGCATCCG
GAACTGCAGT CATGGAAATA TCCGCTGGCC GGCGACAAGG ATGTGACCAT GATCGAGCGG
GTCATCATCG ACGTGCCCAC CCGCAGCGTG CTGCGTCTGA AAACCCCGGC GGATCAACAC
CGCTCCACGC TCTGCGACGA CGTAAGCTGC TCGCCGGGTC TGTGGGACGA TGTGAAGTGG
GCACCGGACA GCAAGACGCT GGCGTTCGCC TCCACCTCGC GCTTCCACAA GCAAACCTGG
TTGCGTATCG CCGATGCCAG CACCGGCGCG GTGCGCACCG CCTTCGACGA AACCGTCAAG
ACCTATTACG AAAGCGGCCA GGTCGCCGCC AATTGGGCGT ATCTGCCGGC CAGCAACGAG
GCAGTGTGGT TTTCCGAACG CAGCGATTGG GGCCAGCTGT ATCTCTACGA TCTGGCCACC
GGCAAACCCA AGCGCGCCAT CACCACCGGC GAAGGCAACG TCACCGAATT GCTGCGCGTG
GACCCGGTCA CGCGCACCGC ATGGTTTGTC GGCGTCGGCC GCAGCGCAGG CGTGGACCCG
TACTACCAGC AGCTGTGGAA AGTCAGCCTG GATGGCGGCG AGCCGGTGTT GCTCACGCCC
GAACCCGCCA ACCACAGCAT CGCGCTGTCG CCCGATGGCG CACGCTTTGT CGACAGCTAT
TCCACCTCGG TCACGCCGCC GGTCACGTTG CTGCGCGACG CCGGCGACGG CCGCACCGTC
AGCACGATCG CCACGGCCGA TATCACCCGC CTCAAGGCGA CCGGCTGGGT GCCGCCAGAA
CCCATTACGG TAAAGGCACG CGACGGCAAG ACCACGCTGT ACGGCTTGAT GTTCAAGCCC
ACCAACTTCG ACCCCACGCG CAAGTATCCG GTCATCGACT ACGTCTACCC GGGCCCGCAA
ACCGGCTCGG TGCACGGGCG CAGCTTCCTG GCCGGCCACG GCGACAACCA GTCGCTGGCC
GAACTGGGCT TCATCGTGGT CGCCATCGAT GGCATGGGCA CGCCGTGGCG CTCCAAAACC
TTCCACGACA CCTGGTACGC CGACATGGGC GACAACACGT TGCCCGACCA GGTCGCCGGC
TTGAAGGAAC TGGGTCAGCG TTATCCGTGG ATCGATCTGG ACCGCGTCGG CATCTGGGGC
CATTCCGGCG GCGGTAATGC CTCCACCGGG GCGATGCTGC GCTATCCGGA TTTCTTCAAG
GTGGCCTGGT CGGAAAGCGG CAATCACGAC AACCGCGGCT ACGAAGACGA TTGGGCCGAG
AAGTATCACG GCGAGCACAT CGTCAACAAG GATGGCACTT CCAACTACGA CGATCAGGCC
AACGCCAACC ATGCCAGCAA ACTCAAGGGC CGGCTGATGC TGGTGCACGG CACCCTGGAC
GACAACGTGC CGCCATACCT CACCTTGCTG GTGGCCGATG CCTTGATCAA GGCCAACAAG
AACTTCGACA TGCTGATGCT GCCCAATGCC AAGCACGGCT ACGGCGACCT CACCCCATAC
GTCACCCGCC GCCGCTGGGA CTACTTCGTG CAGTACCTGC TGGGTGCCAC CCCGCCAGCG
CAGTACCAGA TGAAGCCGAT ACCGGCGAAT TGA
|
|---|
| Protein sequence | MPLRHLLVAI ALATLPALAS AQTPAVTEAD YARAERLISY AAQPLVDHAA TRLHWLDATH
VVYVDHDAKG NRLLQLDTST GKTAPIFKQA ALVASLNTLL KTGDKSLKAD TFAPMVKLTA
DGRYRLNVRD TAVVCDARAR CSKLYAKDKP EPGVLSPDKR SEAFIRDWNL WVRDLASGQE
TQLTRDGVEN FGYATDNAGW QHTDNAIVAW SPDSSKIATF QQDQRKTGDM YLVSTKLGHP
ELQSWKYPLA GDKDVTMIER VIIDVPTRSV LRLKTPADQH RSTLCDDVSC SPGLWDDVKW
APDSKTLAFA STSRFHKQTW LRIADASTGA VRTAFDETVK TYYESGQVAA NWAYLPASNE
AVWFSERSDW GQLYLYDLAT GKPKRAITTG EGNVTELLRV DPVTRTAWFV GVGRSAGVDP
YYQQLWKVSL DGGEPVLLTP EPANHSIALS PDGARFVDSY STSVTPPVTL LRDAGDGRTV
STIATADITR LKATGWVPPE PITVKARDGK TTLYGLMFKP TNFDPTRKYP VIDYVYPGPQ
TGSVHGRSFL AGHGDNQSLA ELGFIVVAID GMGTPWRSKT FHDTWYADMG DNTLPDQVAG
LKELGQRYPW IDLDRVGIWG HSGGGNASTG AMLRYPDFFK VAWSESGNHD NRGYEDDWAE
KYHGEHIVNK DGTSNYDDQA NANHASKLKG RLMLVHGTLD DNVPPYLTLL VADALIKANK
NFDMLMLPNA KHGYGDLTPY VTRRRWDYFV QYLLGATPPA QYQMKPIPAN
|
|---|
| |