| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04137 |
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| Symbol | hemC |
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| ID | 6304387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 873231 |
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| End bp | 874145 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642638165 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001912047 |
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| Protein GI | 188575118 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.870517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACGC TCCGCATCGC TACCCGCAAA AGCCCGCTCG CCCTCTGGCA GAGCGAACAC
GTCGCCGCCG CGTTGCGTCA GCACCACCCT GGACTGGAGG TGGTGCTGGT GCCGATGAGC
ACCCGTGGCG ACGAAGTGCT GGACCGCTCG CTCGCGGCGA TCGGTGGCAA GGGCCTGTTC
TTGAAGGAAC TGGAACTGGC GATGTTGCGC GGCGACGCCG ATTGCGCCGT GCATTCGTTC
AAGGATGTGC CGATGGAACT GGACGACCCG TTCGTGCTGC CTGCGATCCT GGAACGCGGC
GACCCGGCCG ATGCGCTGGT GTCCAACCTC TACGCCAGCC TGCAGGCGCT GCCGCTGGGC
GCACGCGTGG GCACGTCTTC GCTGCGTCGC CAGGCGCAGT TGCGCGCTGC GCGCCCGGAC
CTGGAATTGA TCGACCTGCG CGGCAACGTC AACACGCGTC TGGCCAAGCT CGACAACGGC
GGCTACGACG CCATCGTGCT GGCCTGCGCC GGCCTGCAGC GGCTCGGGTT GGATGAACGC
ATCAGCGCGC GGCTGGATGC ACCGGAGTGG TTGCCGGCGC CTGCACAAGG CGCGGTGGCG
GTGGAATGCC GTGGCGACGA CGCGCGCATC CACAGTCTGC TGGCAGTGCT GGATGCCGGC
CGCACGCGTG CCTGCGTGGA AGCCGAGCGG GCAATGAATC GCGCGCTGCA CGGCAGCTGC
CATGTGCCGG TGGCCGCCCT TGCGCGCTGG GAAGGCGAGG GTCTGTTTCT GCAGGGCATG
GTCGGCAGCG CCAGCGACGG CCGCTTGATC CACGCCGACG CCCATGGCAG TGCCGACGAC
ACTGAAGACC TGGGCCGCCG CGTTGCGCAA GGCCTGTTCG ACAAGGGTGC CGCGCAGTTG
CTGGCTGCGC TGTAA
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| Protein sequence | MTTLRIATRK SPLALWQSEH VAAALRQHHP GLEVVLVPMS TRGDEVLDRS LAAIGGKGLF
LKELELAMLR GDADCAVHSF KDVPMELDDP FVLPAILERG DPADALVSNL YASLQALPLG
ARVGTSSLRR QAQLRAARPD LELIDLRGNV NTRLAKLDNG GYDAIVLACA GLQRLGLDER
ISARLDAPEW LPAPAQGAVA VECRGDDARI HSLLAVLDAG RTRACVEAER AMNRALHGSC
HVPVAALARW EGEGLFLQGM VGSASDGRLI HADAHGSADD TEDLGRRVAQ GLFDKGAAQL
LAAL
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