| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04122 |
|---|
| Symbol | xerC |
|---|
| ID | 6304402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 887589 |
|---|
| End bp | 888506 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638180 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_001912062 |
|---|
| Protein GI | 188575133 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCATCGG TCGACGAATT CCTGACCTAT CTGCAGGTCG AGCGGCAGGT GTCGGCGCAT
ACGTTGGATG CGTATCGACG CGACCTTGCC GCGTTGGTTG CCTGGACAGG CGAGCGCAAC
GCGGAAGACG GCGCGCAGCA AACGGCCACG CCTGTCGACA GTGCGCAGCT AGATAGCGCG
CATTTGCGGC AGTTCGTCGC GGCCGAGCAT CGACGTGGCC TTTCGCCCAA GAGTTTGCAG
CGCCGTTTGT CGGCGTGCCG CAGTTACTAC GCGTGGTTGC TCAAGCATGG CCGCATCGCG
GCCAGTCCGG CGGCGGCACT GCGCGCACCC AAGGCGCAGC GCAAGTTGCC GCAAGTGCTG
GACGCCGACG AAGCCGTGCG TCTGGTGGAA GTGCCAACCG ATGCGCCACT GGGTCTGCGC
GACCGCGCGC TGCTGGAATT GTTCTATTCC TCCGGGCTGC GTCTGAGCGA GCTATGCGCG
TTGCGCTGGC GCGATCTGGA TCTGGACAGC GGCCTGGTGA TGGTGCTCGG CAAGGGCAGC
AAGCAGCGTC TGGTGCCGGT GGGCTCGCAC GCGATTGCCG CCTTGCGCCA ATGGCGTCGC
GACAGTGGTG CAAGCGCCGA TGCGCACGTC TTCCCCGGGC GTACGGGCGG TGCGATTTCG
CAACGCGCAG TGCAGATCCG CATCAAGCAA CTGGCTGTGC GCCAGGGCAT GTTCAAGGAC
GTGCATCCGC ATATGCTGCG CCACAGTTTC GCCAGCCATA TTCTGGAGTC GTCCGGCGAC
CTGCGCGGCG TGCAGGAGTT GCTGGGCCAC TCGGACATCG CCACCACCCA GATCTATACA
CATCTGGATT TCCAGCATCT GGCCAAGGTC TATGACGCTG CGCATCCGCG TGCCAGGCGC
AAGAAAACCG TTGAATAA
|
|---|
| Protein sequence | MSSVDEFLTY LQVERQVSAH TLDAYRRDLA ALVAWTGERN AEDGAQQTAT PVDSAQLDSA
HLRQFVAAEH RRGLSPKSLQ RRLSACRSYY AWLLKHGRIA ASPAAALRAP KAQRKLPQVL
DADEAVRLVE VPTDAPLGLR DRALLELFYS SGLRLSELCA LRWRDLDLDS GLVMVLGKGS
KQRLVPVGSH AIAALRQWRR DSGASADAHV FPGRTGGAIS QRAVQIRIKQ LAVRQGMFKD
VHPHMLRHSF ASHILESSGD LRGVQELLGH SDIATTQIYT HLDFQHLAKV YDAAHPRARR
KKTVE
|
|---|
| |