| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04088 |
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| Symbol | |
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| ID | 6304234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 730430 |
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| End bp | 732571 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642638013 |
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| Product | TonB-dependent outer membrane Receptor |
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| Protein accession | YP_001911895 |
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| Protein GI | 188574966 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTT TCTCGCGCCG CCGCATGCGG CATACGTTGC CCTTGCTCAG CCTGCTGGCC
TGGGCCTGCA GCATTGCCTG CGCGCAGGCC GACGCGTTGC GGGCGCGCGA GCTGGATGCG
GTGCAGGTGC GCAGCCAGTA CACGCCGTAT CGCGAACTGA GCATTACCGG CGCCACCAAG
ACCGATGCGC CGCTGCGTGA TTTGCCGATC AGTGCGCGCG TGCTCGATCG GACCCTGCTG
GACGATGCCG GCGTGACCGA TCTGGCAGGC GCACTGGAAC TGGCCAGCGG CATCACCAAG
GCCAACAACC TGGGCGGGCT CTGGGACAGC TATTCGATGC GCGGCTTCAC CGGCGACCCG
AATTTCAGTT CGGACTACAT GGTCAACGGC TTCAATGCCA GCCGCGGTTA CAACGGCCTG
CGTGATGCGG CCAACACGCA GAGCATCGAA GTCATCAAAG GGCCGGCGTC GGCCTTGTAT
GGCCGTGGCG AGCCGGGTGG GGTGGTCAAC ATCATCACCA AAAAGCCGCT GTTTCAGCCG
CAGAACAGCG TGGATGTGTC GGCCGGTCGC TTCGACAGTT ATCGCGCCGC GATCGATAGC
ACCGGCCCAC TGAGCGAGAG CGTCGCTTAC CGCTTGAACG TGATGCACAA GGATCAGCAT
AGCTTCCGCG ACACTGTCGA CAGCGATAAC ACCTTGCTGG CGCCGTCGCT GTTGTGGATG
CCGACGCCCG AAACCACGGT GTCGTATGAG CTGGAAGCCG TGCGGATCCA TGCGCCGTTC
GATCGCGGCG TGACCGCCAT CGACGGCGAT GCCAACCGGC TGCCGGCGTC GCGCTTTCTG
GGCGAGCCGC GCGATGGCGA CATCGATCTG CATTCCACCG GGCATCAGCT GTTTGTGGTG
CACGGTCTGA ATCAGACCTG GTCGTTGCAG GGTGGGGCGA CCTACCGCGA GAGTGGCATG
CGTGGGTTTT CCACCGAGCC GTGGACACTG CAAGCCGACC AGCGCACCTT GCGCCGCGAA
CGCCGTTACC GCGACTACCA GGGCCGCGAT ATCGCTGCGC GTGCGGAGTT GCTCGGCAGC
CTGCAGGCGG GCAGGGTCAC GCATAATGTG TTGTTAGGCA TCGACGGCAA CCGCTTCGAC
GACAGCCGCT TTCAGCAACG TGCACGTTCC GCGGCGACGC CATACAGCAT CGACGTGCTG
GCGCCGCGCT ACGGTGTGGC GCAGCCGGGG CAGCTGGCTG CCATCACCGA CACCGAAGAG
CGCCAGCAGG TGTGGGGCGC GTACGCGCAG GATCAGATCG ATCTGGGCGC GCGCTGGAAA
GCTTTGCTCG GCCTGCGCTA CGATCACTAC GAGCAAGACT TGGACAACCA CCTGCGGGGC
ACCACACAGC GCGCATCTGA CGGCGTGGTG AGCCCGCGTG CGGGTCTGAC CTTCCTTGTC
GACGATGCGC TCTCGCTGTA TGCGAGTGCG GCAGCGGGCT TTCGCCCCAA TAGCGGTGTC
GGCGCTAACG GGCAAAGTTT TGCGCCGGAA AAGAGCCGCT CGCTGGAGAC CGGCTTGAAA
TACGTGCAGC CTGGCGATGG CCTGGAAGCC ACAGTGGCTG CGTTCCGCAT CGACAAGAAA
AACGTGTTGA GCCTGGACCC GGCCGACACC AGTTTTTCGT TGCCGGTGGG CGAAATGCGC
AGCCAAGGCG TAGAGCTGGA CTTACTCGGC CGGCTCACCC CGCATCTGGC CGCATCGGTG
GGCCTGGCCT ACACCGATCC GCAGGTGACG CGCAGCAGCG CGGCTGCCGC CGGCACCGGA
CTGGCGGAGG GCCGGCGGTT TCCGAATGTG TCGCGTTTCA GCGGTAATGC GTTCTTGAAT
TACGAGCAGC CGTTGACCGG CAAACGTAGC GCTGCGATCG GAATGGGCGT GTCGCACACC
GGCGAACGGC TGGGTTCGGT CGATAGCAAT ACCGATTTTG TGCTGCCCGC TTATACCGTG
TGGCGCGTGG TCGGCCATTA CGATCTGAGC GACCGGCTAC GCCTGTATGC CAAGGTCGAG
AACCTGACCG ACCGCCGCTA CGCTGCATTT TCGTACAGCG AGCAATGGGT GTATCCCGGT
GCGCCGCGGA GCTGGACGGT GGGTGTGCAT TTGCGGTTCT GA
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| Protein sequence | MPVFSRRRMR HTLPLLSLLA WACSIACAQA DALRARELDA VQVRSQYTPY RELSITGATK
TDAPLRDLPI SARVLDRTLL DDAGVTDLAG ALELASGITK ANNLGGLWDS YSMRGFTGDP
NFSSDYMVNG FNASRGYNGL RDAANTQSIE VIKGPASALY GRGEPGGVVN IITKKPLFQP
QNSVDVSAGR FDSYRAAIDS TGPLSESVAY RLNVMHKDQH SFRDTVDSDN TLLAPSLLWM
PTPETTVSYE LEAVRIHAPF DRGVTAIDGD ANRLPASRFL GEPRDGDIDL HSTGHQLFVV
HGLNQTWSLQ GGATYRESGM RGFSTEPWTL QADQRTLRRE RRYRDYQGRD IAARAELLGS
LQAGRVTHNV LLGIDGNRFD DSRFQQRARS AATPYSIDVL APRYGVAQPG QLAAITDTEE
RQQVWGAYAQ DQIDLGARWK ALLGLRYDHY EQDLDNHLRG TTQRASDGVV SPRAGLTFLV
DDALSLYASA AAGFRPNSGV GANGQSFAPE KSRSLETGLK YVQPGDGLEA TVAAFRIDKK
NVLSLDPADT SFSLPVGEMR SQGVELDLLG RLTPHLAASV GLAYTDPQVT RSSAAAAGTG
LAEGRRFPNV SRFSGNAFLN YEQPLTGKRS AAIGMGVSHT GERLGSVDSN TDFVLPAYTV
WRVVGHYDLS DRLRLYAKVE NLTDRRYAAF SYSEQWVYPG APRSWTVGVH LRF
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