Gene PXO_04085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04085 
Symbol 
ID6304231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp726903 
End bp727625 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID642638010 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001911892 
Protein GI188574963 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCG CGATTTCAAT CTGCGACCTG CACGTGGGCT ACCGTGGCCG CGCTGTGCTG 
CAGGGGCTAA CGCTCGACGT CGCGCCTGGC ACCGTCTATG CCTTGCTGGG CGGCAATGGC
GCCGGCAAGT CGTCCACCCT GTCCACGTTG CTGGGCTTCG TCAAACCCAC TTCCGGCAGC
CTGCGGGTGG ACGGCGTGGA CCCGGTCGCC GACCCCGGCA AGGCGCGCGC ACGGTTGGCC
TATCTGCCGG AAAACGTGGC GCTCTACGAG CATCTGAGCG CGCTGGAAAA TGCCGACTAT
CTACTCGCTC TGGCCGGTCA GCGCCGTAGC CAGGCCACCA TCGGTGAGGC ATTCGCCGCG
GCCGGGCTGC AGCGCGATGC CTGGGCGCAA CGGCTGGCGG GGTTTTCCAA AGGCATGCGG
CAAAAAGTGG CGATTGCCGT AGCCACGCTG CGGCAGGTGC CGGTGTTGCT GCTGGACGAG
CCCACCTCCG GGCTGGACCC GCGCGCCATC GCCGACTTCA ATCGCCTGGT GAGCAGCGTG
CGCGAACGCG GCGGCGCGGT GCTGATGGTC ACGCACGATC TGCTCGGTGC GGTGGATGTC
GCCGACCGTC TTGGTTTTCT CGAAAACGGC CGGATTGCCG ACGACATCGG CGCCGGCGAC
AGCGGCTTCG ATGTGCGCAC TCTGCATGCG CGTTTCGCAC GCCCGCAGGA TGAGGCTGCG
TGA
 
Protein sequence
MTPAISICDL HVGYRGRAVL QGLTLDVAPG TVYALLGGNG AGKSSTLSTL LGFVKPTSGS 
LRVDGVDPVA DPGKARARLA YLPENVALYE HLSALENADY LLALAGQRRS QATIGEAFAA
AGLQRDAWAQ RLAGFSKGMR QKVAIAVATL RQVPVLLLDE PTSGLDPRAI ADFNRLVSSV
RERGGAVLMV THDLLGAVDV ADRLGFLENG RIADDIGAGD SGFDVRTLHA RFARPQDEAA