Gene PXO_04079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04079 
Symbol 
ID6304225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp722683 
End bp723918 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content63% 
IMG OID642638004 
ProductISXoo13 transposase 
Protein accessionYP_001911886 
Protein GI188574957 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.208435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCA AGGTGTTTGA AGCGGCGCTG GGGATCGGCG CGCCGTGGTC GGTAGGCGCG 
GTCGAGTTCG ACGAAGCGAC CAAGGTGTTG ACGGTGCCGG TGGACTTCAA GCCGGGCACG
AGGTTCAAGG TATCGGGCCA AAAGGGGCTG CATCCGGTTC ATGACACCGT GGTCAAGACC
TACCGGCACC TGAACTTTTT CCAGCACGAG TGCTACCTGA AGGTTCGCAC GCCGCGTGTG
AAGCTTGGGG ACGGATCGGT TCGCCTGGTC GAGCCGGACT TCGCTGGGCG GTTGTCGGGC
TTCACGCTGT TGTTCGAGGC GCTGGTGCTG ATGTTGTCGC AGCAAATGCC GTTCGCGGCC
GTTGCGCGCA TCGTGGGCGA GTCGGCGTAC CGGTGCATGC AGGTGTGCAA CCGCTATGTC
GAGATGGCCC TGGAGCAGGC CGACTTCAGC GACGTCACGT CGCTGGCCAT CGACGAGACG
TCGCGCGCTC GCGGCCACGA CTATGTGACC TTGGCTGCCG ATGCCCAGGC GCGACGCGTG
ATCTTCGTGA CTGAGGGGCG GGACGCCAAA GCCGTGAAGG CGCTGGCTGA CGATCTGGCA
GCTCATGGCT GCCCTCCCGA ACAGATCACC TCGGTGAGCA TCGACATGTC GCCCGCGTTC
ATCAAGGGCG TAAGCGACCA GTTGCCCAAC GCGCAGATCA CCTTCGACAA GTTCCACGTT
GTCGGACATG CGAACGCGGC CGTGGACAAA ACCAGGCGCA TCGAGCAGCG CACCGAGAAG
TCCCTCAAGG GCATGCGCTG GACGCTGCTC AAGGATGTCT TCAGCCTCAA ACCGACGGCC
GGCGCAGCAT TGCACGGGCT GATCACGGCA CCCAAGCTCA CACGGACGGC CCGCGCGTGG
CTCTACAAGG AGCAGTTGCG CGAGGCGCTT GACCGAAAGC AGATCAACGT GATGCGCGAG
ATGCTCAAGC ACTGGTGCGT CTGCGTGATG CGATCCAAGG TCGAGGCGAT GAAGGAAGTC
GCAGCCCTCG TGCGCCGCCA CATGGACGGC ATCGTCGCCT GGGCGCAGAC CCGTCAGACC
AACGGCTTCC TTGAAGCCAT CAATGGCCTG TTCCAGTCCG CCAAGCGCAG AGCTCGCGGC
TTCAAACGCC TGTCCACCAT CAAGACCGTC ATCTTCCTGA TTGCCGGCAA GCTGGACTTC
CAAACGTTCA ACCCGCATGC CCGGCAACCC ACTTGA
 
Protein sequence
MTAKVFEAAL GIGAPWSVGA VEFDEATKVL TVPVDFKPGT RFKVSGQKGL HPVHDTVVKT 
YRHLNFFQHE CYLKVRTPRV KLGDGSVRLV EPDFAGRLSG FTLLFEALVL MLSQQMPFAA
VARIVGESAY RCMQVCNRYV EMALEQADFS DVTSLAIDET SRARGHDYVT LAADAQARRV
IFVTEGRDAK AVKALADDLA AHGCPPEQIT SVSIDMSPAF IKGVSDQLPN AQITFDKFHV
VGHANAAVDK TRRIEQRTEK SLKGMRWTLL KDVFSLKPTA GAALHGLITA PKLTRTARAW
LYKEQLREAL DRKQINVMRE MLKHWCVCVM RSKVEAMKEV AALVRRHMDG IVAWAQTRQT
NGFLEAINGL FQSAKRRARG FKRLSTIKTV IFLIAGKLDF QTFNPHARQP T