Gene PXO_04056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04056 
Symbolfmt 
ID6304199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp702127 
End bp703050 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID642637980 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001911863 
Protein GI188574934 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCA TCTTTGCCGG TACGCCGGAT TTCGCTGTCG CTTCGTTGCG CGCTGCCGCG 
CAGCGGCATG AGGTGGTGGC GGTCTACACC CAGCCGGATC GGCCCGCCGG GCGCGGCCGC
GGGTTGACGC CCTCGCCGGT CAAGATCGAG GCGATTGCGC GCGGCATTGC GGTGTTCCAG
CCGCAGACGC TGCGTTCGCC CGAAGCGCTG GCGACGCTAC GTTCGCTCAA TGCGGACCTG
ATGGTGGTGG TGGCCTACGG ATTAATTCTG CCCAATGCGG TGCTGGCTGT GCCAACCCAT
GGCTGCTGGA ACGTGCATGC CTCGCTGCTG CCGCGCTGGC GTGGCGCGGC GCCAATCCAG
CGCGCGATCG AGGCCGGCGA TACCGAGACC GGGGTGTGCC TGATGCAGAT GGAAGCCGGG
TTGGATATCG GCCCGGTGCT GCTGTCGCAG CGCATCGAGA TCGGCGAGCA GGAAACCGGC
GGCCAGCTGC ACGACCGCCT GGCTGCGTTG GGGGCGCAGG TATTGTCCGA CGGCCTGGGC
CTGCTGCGCG CCGGCATCCG TCCGGTGGCG CAACCGCAGC CGGCTGAAGG CGTGACCTAT
GCGCATAAGC TGGACAAGGC GCAGGCGCGG CTGGATTGGG CGCAGCCGGC GCAGGAACTG
GCGCGGCGCG TGCGGGCGTT CAACCCGTGG CCGGTGGCCG AGGCGATCCT GGCTGGCGAG
CGCGTGCGAC TGCATGGCGC AGTCGCGTTG GAGCTGGCGC ATCAGCAGCC GCCCGGCAGC
CTGCTGGCGG CCAGCAAGCA GGGCATCGAC ATCGCGTGCG GTCAGGGTGC GCTGCGGGTG
CGGGTGCTCC AGCGCGAGGG GGGCAAGGCG ATCACCGCCG CCGATTATCT CAACGCGCGG
CGCGACCTGC TGGCGCTGCG CTGA
 
Protein sequence
MRIIFAGTPD FAVASLRAAA QRHEVVAVYT QPDRPAGRGR GLTPSPVKIE AIARGIAVFQ 
PQTLRSPEAL ATLRSLNADL MVVVAYGLIL PNAVLAVPTH GCWNVHASLL PRWRGAAPIQ
RAIEAGDTET GVCLMQMEAG LDIGPVLLSQ RIEIGEQETG GQLHDRLAAL GAQVLSDGLG
LLRAGIRPVA QPQPAEGVTY AHKLDKAQAR LDWAQPAQEL ARRVRAFNPW PVAEAILAGE
RVRLHGAVAL ELAHQQPPGS LLAASKQGID IACGQGALRV RVLQREGGKA ITAADYLNAR
RDLLALR