Gene PXO_04038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04038 
Symbol 
ID6304181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp680424 
End bp682646 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content70% 
IMG OID642637962 
Productprimosome assembly protein PriA 
Protein accessionYP_001911845 
Protein GI188574916 
COG category[L] Replication, recombination and repair 
COG ID[COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase 
TIGRFAM ID[TIGR00595] primosomal protein N' 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGA CCGTCGCCAC CCTGCGCGTC GCCTTGCCGG TGCCGCTGCC GCAGTTATTC 
GACTATCTGC CTCCGGCCGA TGCGCCGCTG GCCGACCCGG TGCGGGTCGG CTGCCGGGTG
CGGGTGCCGT TCGGGCCACG CGAGTTGATC GGCGTGGTGG TGGAGATCGG CCAACTGCCC
ACGGCCGACG GCCTGCGCCC GGCACTGGCC TGGTGCGACC AAGCGCCGCT GCTGGTCGAT
GAACTGGCCC GCTCGCTGCA GTGGCTAGCG CGCTACACCC ACGCCCCGCT CGGCGAGGCC
CAGGCCAGCG CCCTGCCCGG CCCCTTGCGC CGCGGCGAGC CGCTGGCCGA TACCCACGCC
TGGGCCTGGC AGCTGACCGA AGCCGGCCGC AGCGGTGCCG CCAGCCTGCG CACGGGCAGC
CGCCCTGCCC TGCTGGCCGC TCTTCTGCTC ACCGGCGCAG TGGGCGAAGA ACAACTGGAC
CCGCTACTGC CGCAATGGCG CGAAGCCGCG CGCAGCCTGG CCAAGCGCAA CTACACCGAA
CGTGTGGCAG TGCCAGCCGA CACCATCTCA CCGCGCCCGG GCAGCGGCCC CCAGCTCAAC
GAGGAACAAC AGGCCGCCGC CGCCGCGATC CGCGCGCATC GCGGTTTCGC CACCTATCTG
CTCGATGGCG TCACCGGCAG CGGCAAGACC GAGGTCTATC TGCAGGCAAT CGCCGATTGC
CTGGCCGCCG GCAGGCAGGC GCTGGTGCTG GTACCGGAGA TCGGCCTGAC ACCGCAGACA
TTAGGCCGCT TCCGGGCGCG CCTGGGCGTG CCGGTGCACG CGCTGCACTC CGGACTCTCC
GATGGCGAGC GCGCACGCGT GTGGGCAGCG GCCTGGCGCG GCGAGGCCAA GCTGATCGTC
GGCACTCGTT CGGCGGTGTT CACTCCGCTG CCGAACGCCG GCCTGATCGT GATCGACGAA
GAACACGACG GCAGCTACAA GCAGCAGGAC GGCATCCGCT ATCACGCGCG CGATTTCGCC
CTGGTGCGCG GCAAGGCGCT GGATGTGCCG GTGATTCTGG GCAGCGCCAC GCCATCGCTG
GAGAGCCTGC ACAACGCCTA CTCGGGCCGC TACCAGCATC TGCGCCTGTC GCGGCGCGCC
GGCGAAGCGC GTCCGCCGCG CGTGCGCGTG CTCGACGTGC GCAAGCGGCC GCTCAAGGAC
GGCCTGTCGC CGGAAGTGCT GGCCGGCATC GGCGCTACCC TGGCGCGCGG CGAGCAAGTC
CTGGTGTTCA AGAACAGGCG TGGCTATGCG CCGGTGCTGC TGTGCCACGA CTGCGGCTGG
ACCGCGGCTT GCCAGCGCTG CAGCACGCCG CTGCACCAGA CCCCGATGAC CGTGCATGCC
GGCGGCCGCC GCCTGCAGTG CCACCATTGC GGCGCGCGCC AACCTGCACC GCTGGCCTGC
CCGGCCTGCG CCAGCCTGGC GCTGCAGCCG CAGGGCATCG GCACCGAGCG ACTGGAAGAG
CGCTTGACCG ACGCCTTCCC GGACGTGCCG GTGGTGCGCA TCGACCGCAG CACCACCCAG
CGCCGCGACG CACTGGAAAC CCAGTTCGCC CGACTCGGCA CCGAGGCCGG CATCCTGGTC
GGCACGCAGA TCCTGGCCAA GGGCCACGAC CTGCCCCGGC TGACCATGGT GGTGGTGGTC
GGCATCGACG AAGGCCTGTT TTCGGCCGAC TTCCGCGCCG CCGAAAAACT GGCCCAGCAG
TTGATCCAGG TAGCAGGACG CGCCGGCCGC GCCGACCGCC CGGGCGAAGT CTGGTTGCAG
ACCCATCACC CCGAACATCC GTTGCTGCAG ACCCTGGTCA ACGGCGGCTA CCACGCCTTT
GCCGACGCCG AGCTGCAACA GCGCGAAGCG GCCGGATTCC CACCCTTCGC GCACCTGGCC
TTGTTCCGTG CCGAAGCCAA GGATGTGGCT GCGGCCAATC ACTTCCTATT GGCGGTGCGT
GGTTTGACCA GCACCGACCC CAGCACCCAA TCGCCGGCGT TTGCCGCAGT AGAATGCTAC
GGCCCGATGC CGGCCCCAAT GCCACGCCGC GCCGGATTCC AGCGCACCCA ACTGCTGTTG
TCGGCGCAAC AACGCTCGGC GTTGCATCGC TTGCTCGATA CGCAACTGCC GGCGATCCAT
GCGCTTCCGC AAGCCCGCCG CGTACGCTGG TCGCTGGATG TGGACCCGAT CGATTTGTAT
TAG
 
Protein sequence
MSSTVATLRV ALPVPLPQLF DYLPPADAPL ADPVRVGCRV RVPFGPRELI GVVVEIGQLP 
TADGLRPALA WCDQAPLLVD ELARSLQWLA RYTHAPLGEA QASALPGPLR RGEPLADTHA
WAWQLTEAGR SGAASLRTGS RPALLAALLL TGAVGEEQLD PLLPQWREAA RSLAKRNYTE
RVAVPADTIS PRPGSGPQLN EEQQAAAAAI RAHRGFATYL LDGVTGSGKT EVYLQAIADC
LAAGRQALVL VPEIGLTPQT LGRFRARLGV PVHALHSGLS DGERARVWAA AWRGEAKLIV
GTRSAVFTPL PNAGLIVIDE EHDGSYKQQD GIRYHARDFA LVRGKALDVP VILGSATPSL
ESLHNAYSGR YQHLRLSRRA GEARPPRVRV LDVRKRPLKD GLSPEVLAGI GATLARGEQV
LVFKNRRGYA PVLLCHDCGW TAACQRCSTP LHQTPMTVHA GGRRLQCHHC GARQPAPLAC
PACASLALQP QGIGTERLEE RLTDAFPDVP VVRIDRSTTQ RRDALETQFA RLGTEAGILV
GTQILAKGHD LPRLTMVVVV GIDEGLFSAD FRAAEKLAQQ LIQVAGRAGR ADRPGEVWLQ
THHPEHPLLQ TLVNGGYHAF ADAELQQREA AGFPPFAHLA LFRAEAKDVA AANHFLLAVR
GLTSTDPSTQ SPAFAAVECY GPMPAPMPRR AGFQRTQLLL SAQQRSALHR LLDTQLPAIH
ALPQARRVRW SLDVDPIDLY