Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04038 |
Symbol | |
ID | 6304181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 680424 |
End bp | 682646 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642637962 |
Product | primosome assembly protein PriA |
Protein accession | YP_001911845 |
Protein GI | 188574916 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCGA CCGTCGCCAC CCTGCGCGTC GCCTTGCCGG TGCCGCTGCC GCAGTTATTC GACTATCTGC CTCCGGCCGA TGCGCCGCTG GCCGACCCGG TGCGGGTCGG CTGCCGGGTG CGGGTGCCGT TCGGGCCACG CGAGTTGATC GGCGTGGTGG TGGAGATCGG CCAACTGCCC ACGGCCGACG GCCTGCGCCC GGCACTGGCC TGGTGCGACC AAGCGCCGCT GCTGGTCGAT GAACTGGCCC GCTCGCTGCA GTGGCTAGCG CGCTACACCC ACGCCCCGCT CGGCGAGGCC CAGGCCAGCG CCCTGCCCGG CCCCTTGCGC CGCGGCGAGC CGCTGGCCGA TACCCACGCC TGGGCCTGGC AGCTGACCGA AGCCGGCCGC AGCGGTGCCG CCAGCCTGCG CACGGGCAGC CGCCCTGCCC TGCTGGCCGC TCTTCTGCTC ACCGGCGCAG TGGGCGAAGA ACAACTGGAC CCGCTACTGC CGCAATGGCG CGAAGCCGCG CGCAGCCTGG CCAAGCGCAA CTACACCGAA CGTGTGGCAG TGCCAGCCGA CACCATCTCA CCGCGCCCGG GCAGCGGCCC CCAGCTCAAC GAGGAACAAC AGGCCGCCGC CGCCGCGATC CGCGCGCATC GCGGTTTCGC CACCTATCTG CTCGATGGCG TCACCGGCAG CGGCAAGACC GAGGTCTATC TGCAGGCAAT CGCCGATTGC CTGGCCGCCG GCAGGCAGGC GCTGGTGCTG GTACCGGAGA TCGGCCTGAC ACCGCAGACA TTAGGCCGCT TCCGGGCGCG CCTGGGCGTG CCGGTGCACG CGCTGCACTC CGGACTCTCC GATGGCGAGC GCGCACGCGT GTGGGCAGCG GCCTGGCGCG GCGAGGCCAA GCTGATCGTC GGCACTCGTT CGGCGGTGTT CACTCCGCTG CCGAACGCCG GCCTGATCGT GATCGACGAA GAACACGACG GCAGCTACAA GCAGCAGGAC GGCATCCGCT ATCACGCGCG CGATTTCGCC CTGGTGCGCG GCAAGGCGCT GGATGTGCCG GTGATTCTGG GCAGCGCCAC GCCATCGCTG GAGAGCCTGC ACAACGCCTA CTCGGGCCGC TACCAGCATC TGCGCCTGTC GCGGCGCGCC GGCGAAGCGC GTCCGCCGCG CGTGCGCGTG CTCGACGTGC GCAAGCGGCC GCTCAAGGAC GGCCTGTCGC CGGAAGTGCT GGCCGGCATC GGCGCTACCC TGGCGCGCGG CGAGCAAGTC CTGGTGTTCA AGAACAGGCG TGGCTATGCG CCGGTGCTGC TGTGCCACGA CTGCGGCTGG ACCGCGGCTT GCCAGCGCTG CAGCACGCCG CTGCACCAGA CCCCGATGAC CGTGCATGCC GGCGGCCGCC GCCTGCAGTG CCACCATTGC GGCGCGCGCC AACCTGCACC GCTGGCCTGC CCGGCCTGCG CCAGCCTGGC GCTGCAGCCG CAGGGCATCG GCACCGAGCG ACTGGAAGAG CGCTTGACCG ACGCCTTCCC GGACGTGCCG GTGGTGCGCA TCGACCGCAG CACCACCCAG CGCCGCGACG CACTGGAAAC CCAGTTCGCC CGACTCGGCA CCGAGGCCGG CATCCTGGTC GGCACGCAGA TCCTGGCCAA GGGCCACGAC CTGCCCCGGC TGACCATGGT GGTGGTGGTC GGCATCGACG AAGGCCTGTT TTCGGCCGAC TTCCGCGCCG CCGAAAAACT GGCCCAGCAG TTGATCCAGG TAGCAGGACG CGCCGGCCGC GCCGACCGCC CGGGCGAAGT CTGGTTGCAG ACCCATCACC CCGAACATCC GTTGCTGCAG ACCCTGGTCA ACGGCGGCTA CCACGCCTTT GCCGACGCCG AGCTGCAACA GCGCGAAGCG GCCGGATTCC CACCCTTCGC GCACCTGGCC TTGTTCCGTG CCGAAGCCAA GGATGTGGCT GCGGCCAATC ACTTCCTATT GGCGGTGCGT GGTTTGACCA GCACCGACCC CAGCACCCAA TCGCCGGCGT TTGCCGCAGT AGAATGCTAC GGCCCGATGC CGGCCCCAAT GCCACGCCGC GCCGGATTCC AGCGCACCCA ACTGCTGTTG TCGGCGCAAC AACGCTCGGC GTTGCATCGC TTGCTCGATA CGCAACTGCC GGCGATCCAT GCGCTTCCGC AAGCCCGCCG CGTACGCTGG TCGCTGGATG TGGACCCGAT CGATTTGTAT TAG
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Protein sequence | MSSTVATLRV ALPVPLPQLF DYLPPADAPL ADPVRVGCRV RVPFGPRELI GVVVEIGQLP TADGLRPALA WCDQAPLLVD ELARSLQWLA RYTHAPLGEA QASALPGPLR RGEPLADTHA WAWQLTEAGR SGAASLRTGS RPALLAALLL TGAVGEEQLD PLLPQWREAA RSLAKRNYTE RVAVPADTIS PRPGSGPQLN EEQQAAAAAI RAHRGFATYL LDGVTGSGKT EVYLQAIADC LAAGRQALVL VPEIGLTPQT LGRFRARLGV PVHALHSGLS DGERARVWAA AWRGEAKLIV GTRSAVFTPL PNAGLIVIDE EHDGSYKQQD GIRYHARDFA LVRGKALDVP VILGSATPSL ESLHNAYSGR YQHLRLSRRA GEARPPRVRV LDVRKRPLKD GLSPEVLAGI GATLARGEQV LVFKNRRGYA PVLLCHDCGW TAACQRCSTP LHQTPMTVHA GGRRLQCHHC GARQPAPLAC PACASLALQP QGIGTERLEE RLTDAFPDVP VVRIDRSTTQ RRDALETQFA RLGTEAGILV GTQILAKGHD LPRLTMVVVV GIDEGLFSAD FRAAEKLAQQ LIQVAGRAGR ADRPGEVWLQ THHPEHPLLQ TLVNGGYHAF ADAELQQREA AGFPPFAHLA LFRAEAKDVA AANHFLLAVR GLTSTDPSTQ SPAFAAVECY GPMPAPMPRR AGFQRTQLLL SAQQRSALHR LLDTQLPAIH ALPQARRVRW SLDVDPIDLY
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