| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04020 |
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| Symbol | ctaD |
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| ID | 6304163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 664050 |
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| End bp | 665654 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642637944 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001911827 |
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| Protein GI | 188574898 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCATA CCGCAGTCGA TCACCACGGA CACCACCAGC CCGGTTTCGT CGAGCGCTGG
TTCTTTTCGA CCAATCACAA GGACATCGGC ACGCTGTACC TGCTGTTTTC CTTCGTGATG
TTCATCATCG GCGCGGCGAT GAGCGTGGTG ATTCGCGCCG AATTGATGCA GCCCGGCTTG
CAGTTCGTCA AACCGGAATT CTTCAACCAG ATGACCACCG TGCATGCACT GGTGATGATC
TTCGGCGGCG TGATGCCGGC CTTCGTTGGC TTGGCCAACT GGATGATCCC GTTGCAGATC
GGCGCACCGG ACATGGCGTT GCCGCGCATG AACAACTGGT CGTTCTGGCT GCTGCCGGTC
GCCTTTACGC TGCTGCTGCT GACGCTGTTT CTGCCGGGCG GCGGACCAGC GGGTGGCTGG
ACCTTGTACC CGCCGCTGTC GCTGCAAGGC GGCTACAACG TGGCTTTCAG CGTATTTGCG
ATCCATGTGG CCGGCGTCAG TTCGATCATG GGCGCGATCA ACATCATCGC CACCGTGCTC
AACATGCGCG CGCCGGGCAT CGATCTGTTG AAGATGCCGA TCTTCTGCTG GGCCTGGCTG
ATTACCGCCT TCCTGCTGAT TGCGGTGATG CCGGTGCTGG CCGGCGCAGT GACCATGTTG
CTCACAGACA AATTCTTCGG CACCAGTTTC TTCAACGCGG CCGGCGGCGG CGACCCGGTG
ATGTATCAGC ACATCTTCTG GTTCTTTGGG CACCCCGAGG TGTACATCAT GATCCTGCCG
GCGTTCGGCG TGGTCAGCGA AATCATCCCG ACCTTCAGCC GCAAGCCGCT GTTCGGTTAC
CAGGCGATGG TGTACGCCAT CGCGGCGATC GCATTCCTGA GCTTCATCGT GTGGGCGCAC
CACATGTTCA CCGTGGGCAT GCCGCTCGGT GGCGAAATCT ATTTCATGTT CGCCACGATG
CTGATTTCCA TCCCGACCGG GGTGAAGGTG TTCAACTGGG TCAGCACGAT GTGGAAAGGC
TCGCTGACCT TCGAATCGCC GATGTTGTGG GCAGTGGCGT TCGTGATCCT CTTCAGCATC
GGTGGCTTTT CCGGCCTGAT GCTGGCGATC GTGCCAGCCG ACTTCCAGTA TCACGACACC
TATTTCGTAG TGGCGCATTT TCACTACGTG CTGGTGACCG GCGCGGTGTT TGCGCTGATT
GCGGCGGTGT ATTACTGGTG GCCCAAGTGG ACCGGGCGGA TCTACAACGA AACCTGGGCC
AAGGTGCACT TCTGGTGGAC GATGGTGTTC GTCAATCTGC TGTTCTTCCC GCAGCACTTC
CTCGGCCTGG CCGGCATGCC GCGGCGTATT CCTGATTACA ACGTAGTATT CGCCGACTGG
AATCTGGTCA GTTCGATCGG TGCGTTCGGT ATGTTCGTCA CGCCGTTCCT GATGGCCGCG
ATTCTGCTTT CCTCGCTGCG TAGTGGCGCG CGGGCAGACG CGCGTGCCTG GGAAGGTGCC
AAGGGCCTGG AATGGACGGT TCCTTCGCCT GCCCCGGCGC ATACCTTTAC CGTGCCGCCG
GTGATCAAGC CTGGAGACCT TGCGCATGAA GACATCGGTC ATTGA
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| Protein sequence | MAHTAVDHHG HHQPGFVERW FFSTNHKDIG TLYLLFSFVM FIIGAAMSVV IRAELMQPGL
QFVKPEFFNQ MTTVHALVMI FGGVMPAFVG LANWMIPLQI GAPDMALPRM NNWSFWLLPV
AFTLLLLTLF LPGGGPAGGW TLYPPLSLQG GYNVAFSVFA IHVAGVSSIM GAINIIATVL
NMRAPGIDLL KMPIFCWAWL ITAFLLIAVM PVLAGAVTML LTDKFFGTSF FNAAGGGDPV
MYQHIFWFFG HPEVYIMILP AFGVVSEIIP TFSRKPLFGY QAMVYAIAAI AFLSFIVWAH
HMFTVGMPLG GEIYFMFATM LISIPTGVKV FNWVSTMWKG SLTFESPMLW AVAFVILFSI
GGFSGLMLAI VPADFQYHDT YFVVAHFHYV LVTGAVFALI AAVYYWWPKW TGRIYNETWA
KVHFWWTMVF VNLLFFPQHF LGLAGMPRRI PDYNVVFADW NLVSSIGAFG MFVTPFLMAA
ILLSSLRSGA RADARAWEGA KGLEWTVPSP APAHTFTVPP VIKPGDLAHE DIGH
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