Gene PXO_03985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03985 
Symbol 
ID6304126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp632637 
End bp633278 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID642637909 
Producttransposase (IS4 family) 
Protein accessionYP_001911794 
Protein GI188574865 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTCCCA ACGATTTCCC GCCTTGGGAA GCGGTGTATC AGCAAACGCA GCGGTGGCTG 
CAGGCTGGCT GCTTCGAAGC CATGGTCAGC GATCTGCGCT CACTCTTGCG TGTGGCGCAC 
GGGAAGAAAG GCCAGCCGAG CGCGGTCATT TTCGATGCCC GTACGCTGCA GTCCACCTGC 
GAAAGCGGGC CGCGTGCTGG ATACGATGGC TATAAGCGCA AGAAAGGCAG CAAGGTGCAC 
ATGGCGGTCG ATACGCTGGG ACATCTGCTC GCCGTCCAGG TCACGCCAGC CAATGAGCAG 
GAGCGCGCGC AAGTGCGATC GTTGGACCAA GAGGTACAAC ACGTGACCGG TGAAACGGTC 
AAGATCGCCT TTGTGGATCA GGGCTATACC GGCGAAGAAC CGGCACAAGC GGCCAAGGAA 
GAAGGCATCG AATTGCACGT CATCAAACTG CAAGAAACAA AGAAAGGCTT TGTTTTGCTG 
CCGCGCCGCT GGGTCGTCGA GCGCAGCTTT GGATGGGTCA ATCGTTTCAG GCGACTGGCA 
CGCGACTACG AGCGATTACC GGAAACCTTG GCCGGTTTGC ACTTTGTTGT CTTCACGATT 
CTGATGCTTG GAAATGCAGC CACGCTCTTT CAAAGTTCAT AA
 
Protein sequence
MLPNDFPPWE AVYQQTQRWL QAGCFEAMVS DLRSLLRVAH GKKGQPSAVI FDARTLQSTC 
ESGPRAGYDG YKRKKGSKVH MAVDTLGHLL AVQVTPANEQ ERAQVRSLDQ EVQHVTGETV 
KIAFVDQGYT GEEPAQAAKE EGIELHVIKL QETKKGFVLL PRRWVVERSF GWVNRFRRLA 
RDYERLPETL AGLHFVVFTI LMLGNAATLF QSS