Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03985 |
Symbol | |
ID | 6304126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 632637 |
End bp | 633278 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642637909 |
Product | transposase (IS4 family) |
Protein accession | YP_001911794 |
Protein GI | 188574865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTCCCA ACGATTTCCC GCCTTGGGAA GCGGTGTATC AGCAAACGCA GCGGTGGCTG CAGGCTGGCT GCTTCGAAGC CATGGTCAGC GATCTGCGCT CACTCTTGCG TGTGGCGCAC GGGAAGAAAG GCCAGCCGAG CGCGGTCATT TTCGATGCCC GTACGCTGCA GTCCACCTGC GAAAGCGGGC CGCGTGCTGG ATACGATGGC TATAAGCGCA AGAAAGGCAG CAAGGTGCAC ATGGCGGTCG ATACGCTGGG ACATCTGCTC GCCGTCCAGG TCACGCCAGC CAATGAGCAG GAGCGCGCGC AAGTGCGATC GTTGGACCAA GAGGTACAAC ACGTGACCGG TGAAACGGTC AAGATCGCCT TTGTGGATCA GGGCTATACC GGCGAAGAAC CGGCACAAGC GGCCAAGGAA GAAGGCATCG AATTGCACGT CATCAAACTG CAAGAAACAA AGAAAGGCTT TGTTTTGCTG CCGCGCCGCT GGGTCGTCGA GCGCAGCTTT GGATGGGTCA ATCGTTTCAG GCGACTGGCA CGCGACTACG AGCGATTACC GGAAACCTTG GCCGGTTTGC ACTTTGTTGT CTTCACGATT CTGATGCTTG GAAATGCAGC CACGCTCTTT CAAAGTTCAT AA
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Protein sequence | MLPNDFPPWE AVYQQTQRWL QAGCFEAMVS DLRSLLRVAH GKKGQPSAVI FDARTLQSTC ESGPRAGYDG YKRKKGSKVH MAVDTLGHLL AVQVTPANEQ ERAQVRSLDQ EVQHVTGETV KIAFVDQGYT GEEPAQAAKE EGIELHVIKL QETKKGFVLL PRRWVVERSF GWVNRFRRLA RDYERLPETL AGLHFVVFTI LMLGNAATLF QSS
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