| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03960 |
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| Symbol | yibK |
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| ID | 6304100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 604148 |
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| End bp | 604624 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642637883 |
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| Product | hypothetical tRNA/rRNA methyltransferase YibK |
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| Protein accession | YP_001911768 |
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| Protein GI | 188574839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGCAC CTGTCCTCGA TGTCATCCTG TTTCAGCCCG AAATTCCGCC CAATACGGGC
AATGTGATTC GCTTGTGCGC CAATACCGGC GCGCGCCTGC ACCTGATCGA GCCGCTCGGC
TTCGACCTCA GCGACAAGCA GCTCAAGCGC GCCGGCCTGG ACTATCACGA ATACGCACCG
CTCAAGGTGC ATGTCGATTT GCCCAGCGCC CTGGCCGCAA TCGCGCCCAA GCGCGTGTTT
GCATTGAGCA CCCGCAGCAC GGTGCGCTAC GACACACCGC AGTTCGCCGA TGGCGATGCA
TTTTTGTTCG GCCCGGAAAC CCGCGGCCTG CCAACCGAGG TGTTGGAGTC GATTCCGCCG
CAGCACCGGC TCCGTCTGCC CATGCGCCCG GACAACCGCA GCCTCAATCT GTCCAACACC
GTTGCAGTGA TGGTGTTCGA AGCCTGGCGG CAATGGAATT TCGCTGGCGG CCAGTAG
|
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| Protein sequence | MSAPVLDVIL FQPEIPPNTG NVIRLCANTG ARLHLIEPLG FDLSDKQLKR AGLDYHEYAP
LKVHVDLPSA LAAIAPKRVF ALSTRSTVRY DTPQFADGDA FLFGPETRGL PTEVLESIPP
QHRLRLPMRP DNRSLNLSNT VAVMVFEAWR QWNFAGGQ
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