Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03939 |
Symbol | |
ID | 6304079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 580992 |
End bp | 581798 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642637862 |
Product | transposase |
Protein accession | YP_001911747 |
Protein GI | 188574818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.796315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGGCT TCATCTGCGT TTTCGGTGTG CTGGAATTGC CAGTGTTCGT TACGCTACGT CCTGGTTTCT GGCCGTTTTC GCCCATGCGG ACACGCCGTC CTGCCGCCGA GCAGTTGCCT GCCGATGAGC TGTGTCGTTC GCGCCTGGAG AACCAGATCG ACGTGCGCCA TCCCCTGGTC CAGCTGAGCC ATCGGCTGCC GTGGAGTGCG TTGGAGCAGG CGCTGTCGCC GCGGTTGCCG GCCACCACCG GCGCAGGCGG TCCGCCCGCA TTGCCGGTGC GTCTGATCGC CGGGCTGCTC TACCTTAAGC ACGCCTACGA CCTGTCCGAC GAGGCGGTCT GCGAGCGCTG GCTGGAAAAT CCGTACTGGC AGTTCTTCAC CGGCGAGGTG GTGTTCCAGA CCTGCGTGCC GTGCGATCCC AGCTCCCTGA CCCGTTGGCG ACAGCGTCTG GGCGAAGCCG GTATGGAAGC GCTGTTGGCG CATACGATCA ACACCGCTCA CGCGATGAAG GCGGTGGACG CACGCGAGTT GTCGCGGGTG ATCGTGGATA CCACCATGCA GGAAAAAGCG ATCGCCCATC CCACCGACAG CCGTTTGCTG GAGGTGGCGC GCAAGAAGCT GGTGCTGCTG GCCAAGCGAC ACGGCATCGC ACTGCGACAG AGCGATGCGC GGCAAGGTCC GGCGTTGCGC CGCAAGGCCG GGCGCTATGC GCATGCGCAA GGTGCTGCGA CGCCAACGCA CGATCCTGGG ACGCGTATGA CGCGATCTGC AACGCAAGCT GGCCCAGCTG AAACCGTCGG TGCGTGA
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Protein sequence | MQGFICVFGV LELPVFVTLR PGFWPFSPMR TRRPAAEQLP ADELCRSRLE NQIDVRHPLV QLSHRLPWSA LEQALSPRLP ATTGAGGPPA LPVRLIAGLL YLKHAYDLSD EAVCERWLEN PYWQFFTGEV VFQTCVPCDP SSLTRWRQRL GEAGMEALLA HTINTAHAMK AVDARELSRV IVDTTMQEKA IAHPTDSRLL EVARKKLVLL AKRHGIALRQ SDARQGPALR RKAGRYAHAQ GAATPTHDPG TRMTRSATQA GPAETVGA
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