Gene PXO_03939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03939 
Symbol 
ID6304079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp580992 
End bp581798 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID642637862 
Producttransposase 
Protein accessionYP_001911747 
Protein GI188574818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.796315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGGCT TCATCTGCGT TTTCGGTGTG CTGGAATTGC CAGTGTTCGT TACGCTACGT 
CCTGGTTTCT GGCCGTTTTC GCCCATGCGG ACACGCCGTC CTGCCGCCGA GCAGTTGCCT
GCCGATGAGC TGTGTCGTTC GCGCCTGGAG AACCAGATCG ACGTGCGCCA TCCCCTGGTC
CAGCTGAGCC ATCGGCTGCC GTGGAGTGCG TTGGAGCAGG CGCTGTCGCC GCGGTTGCCG
GCCACCACCG GCGCAGGCGG TCCGCCCGCA TTGCCGGTGC GTCTGATCGC CGGGCTGCTC
TACCTTAAGC ACGCCTACGA CCTGTCCGAC GAGGCGGTCT GCGAGCGCTG GCTGGAAAAT
CCGTACTGGC AGTTCTTCAC CGGCGAGGTG GTGTTCCAGA CCTGCGTGCC GTGCGATCCC
AGCTCCCTGA CCCGTTGGCG ACAGCGTCTG GGCGAAGCCG GTATGGAAGC GCTGTTGGCG
CATACGATCA ACACCGCTCA CGCGATGAAG GCGGTGGACG CACGCGAGTT GTCGCGGGTG
ATCGTGGATA CCACCATGCA GGAAAAAGCG ATCGCCCATC CCACCGACAG CCGTTTGCTG
GAGGTGGCGC GCAAGAAGCT GGTGCTGCTG GCCAAGCGAC ACGGCATCGC ACTGCGACAG
AGCGATGCGC GGCAAGGTCC GGCGTTGCGC CGCAAGGCCG GGCGCTATGC GCATGCGCAA
GGTGCTGCGA CGCCAACGCA CGATCCTGGG ACGCGTATGA CGCGATCTGC AACGCAAGCT
GGCCCAGCTG AAACCGTCGG TGCGTGA
 
Protein sequence
MQGFICVFGV LELPVFVTLR PGFWPFSPMR TRRPAAEQLP ADELCRSRLE NQIDVRHPLV 
QLSHRLPWSA LEQALSPRLP ATTGAGGPPA LPVRLIAGLL YLKHAYDLSD EAVCERWLEN
PYWQFFTGEV VFQTCVPCDP SSLTRWRQRL GEAGMEALLA HTINTAHAMK AVDARELSRV
IVDTTMQEKA IAHPTDSRLL EVARKKLVLL AKRHGIALRQ SDARQGPALR RKAGRYAHAQ
GAATPTHDPG TRMTRSATQA GPAETVGA