Gene PXO_03937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03937 
Symbol 
ID6304077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp578483 
End bp579700 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID642637861 
ProductISXoo6 transposase 
Protein accessionYP_001911746 
Protein GI188574817 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTGTT CGGGAAACTC TGAACACCTC CCCCTGATCC TGCGACAATC GCACAGACGC 
AACGTGACGA CGACGATGCA ACTGACCTTC GGCGACGCGG AGTACAACGG CAAGCGCAAG
CGGACGCGGC GTGAGGTGTT CTTGGCCGAG ATGGACCAGG TCGTGCCGTG GAAGGGCCTG
CTGGCGCTGA TCGAGCCGCA CTATCCAAAG TCGGGGCAGC CGGGGCGACA GCCGTATCGG
CTGGAAACGA TGCTGCGCAT CCACTTTTTG CAGCAGTGGT ATGCGCTGAG CGATCCCTCG
GCGGAAGAAG CGCTGTACGA CACGGTGTCG ATGCGCCGTT TCGCCAAGAT CGGCGGGCTG
GACGAGGTGC CGGATGAAAC GACGATTCTC CACTTCCGGC ATCTGCTGGA GCGGCATGAT
CTGGCGCGCA AGCTGTTCAG GGTCAACGCG CACCTGTCGC GTAAAGGGCA GAGTCTGCGG
GGCGGGACGA TCGTGGATGC CACGATCATT GCGGCGCGCA GTTCGACCAA GAACAAGCAG
GGCGAGCGCG ATCCGGACAT GCACCAGACC AAGAAAGGGA ATCAGTATGA CTTCGGGATG
AAGGCGCACA TCGGGGTGGA CGATGACTCC GGGCTGGTGC ACCACGTCGA ATGCACGGCG
GCCAACGTGG CCGATATCAC GCAAGCGCAC AAGCTGCTGC ACGGCAAGGA AGACACGGTG
TGCGGGGACA GCGGCTACAC CGGGCTTGAG AAGCGCGAGG AGATGAAGCG CAAGCGCACG
CTGCGCTACC TGATCGCCGA GAAACCCTCG AAGCTGAAGC AGATCAAGAA CAAACGCGAA
CTGAAGTTGG CCAAGCGCTG GGAGCACACC AAGGCCAGCC TGCGGGCGAA GGTGGAACAC
CCGTTCCGGG TGATCAAGCG TCAGTTTGGC TACGTCAAGG TGCGCTATCG CGGCCTGGTC
AAGAACACCG CGCAGATGCT GACGCTGTTT GCGCTGTCGA ATCTGTGGCT GAAGCGCAAA
GAGTTAATGC CCGCTGCGGG GAAGGTGTGC CTGTCACCCG GGAAATACAC CGAAAACGCG
CCGAAAACGG CAAAAAATCA GGGGTTTGAG CGCCCTCAGC GCCGCAGATG TGGCTTGCTT
CATTTCCCGG CCGCGTTGAT CAGACCATCC CTAACGCCGG AATTAAGCCG AGTTGCGAAG
CAACTTCGGA TTGAATGA
 
Protein sequence
MNCSGNSEHL PLILRQSHRR NVTTTMQLTF GDAEYNGKRK RTRREVFLAE MDQVVPWKGL 
LALIEPHYPK SGQPGRQPYR LETMLRIHFL QQWYALSDPS AEEALYDTVS MRRFAKIGGL
DEVPDETTIL HFRHLLERHD LARKLFRVNA HLSRKGQSLR GGTIVDATII AARSSTKNKQ
GERDPDMHQT KKGNQYDFGM KAHIGVDDDS GLVHHVECTA ANVADITQAH KLLHGKEDTV
CGDSGYTGLE KREEMKRKRT LRYLIAEKPS KLKQIKNKRE LKLAKRWEHT KASLRAKVEH
PFRVIKRQFG YVKVRYRGLV KNTAQMLTLF ALSNLWLKRK ELMPAAGKVC LSPGKYTENA
PKTAKNQGFE RPQRRRCGLL HFPAALIRPS LTPELSRVAK QLRIE