Gene PXO_03936 details

Gene Information

• Locus tag: PXO_03936
• ID: 6304076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 577774
• End bp: 578505
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642637860
• Product: transposase
• Protein accession: YP_001911745
• Protein GI: 188574816
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3415] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGGCAT CCATGCCGCC AAGGGGCCCG CGGAAGAGAG ACGGACGCTT GGTATCGCGG 
GCAGCGCTGG AAGAAATGCG CCTGATGGCG TTGCAACCGA TGGGCGAAGG CGAATCGCCG 
GCCGAAGTGG CCTCGTCGTT CGGGTTGCAT CGCGGCTGGG CGTACACAGT GCTGGCGCGA 
GCACAGGAGG GCGGCGCTGG CGCATTGATG ACGCGTAAGG GCAGCGGTCG CCCGCGGACG 
TTGACGCCGG CGCAGGAGCG CCAGGTGTTG GGCTGGGTCA ATGGCAAGAA CCCTCGCCAG 
CATGGCTTCG CCTTCGGTCT GTGGACGCGG CAGGTCGTGC GAGAACTGAT CGAGAAGAAG 
TTTGCCGCAC GGTTGAGTCT GGCCAGCGTC GGGACGTTGC TGGCGCGGCT GGGGCTGAGC 
CCACAGAAGC CGCTGCAACA CGCCTATCAG CGCGATCCAC TGGCGGTAGC GCAGTGGCAG 
GAGCAGACGT CCCCGGCGAT CGTGAAGCAC GCCAAGCGGG AAAAGGCCGA GATTGACTTC 
TGGGACGAGT CTGGCTTCCG TGCCGATGTG GTGCAAGGAC GGACGTGGGC CGTCAAGGGC 
GTCACGCCGG TTGTCGCGGT GCCGGGGCAG CGCCAGAGCA TCAGTGCGGC CTCGGCGGTG 
AACAGCAAGG GCGGGTTCTG GTTCGCCGTG TACAGCGGCG GCTTGAACGG TGAATTGTTC 
GGGAAACTCT GA 

 

Protein sequence

MAASMPPRGP RKRDGRLVSR AALEEMRLMA LQPMGEGESP AEVASSFGLH RGWAYTVLAR 
AQEGGAGALM TRKGSGRPRT LTPAQERQVL GWVNGKNPRQ HGFAFGLWTR QVVRELIEKK 
FAARLSLASV GTLLARLGLS PQKPLQHAYQ RDPLAVAQWQ EQTSPAIVKH AKREKAEIDF 
WDESGFRADV VQGRTWAVKG VTPVVAVPGQ RQSISAASAV NSKGGFWFAV YSGGLNGELF 
GKL