Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03932 |
Symbol | |
ID | 6304072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 571225 |
End bp | 572070 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637856 |
Product | ISXoo3 transposase ORF B |
Protein accession | YP_001911741 |
Protein GI | 188574812 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGCG CACCGGCGCG TCGTGCGCTG GTGCGCGAGT GGGTCGAAGG TGGCGCCAGC GAGCGCTGCG CCCTTGCGGC GATCGGCATG AGCGCCAGTG CGCTGCGCTA TCGCCCGGGC GAGGACCGCA ACGTTGAGTT GCGCGAGCGC ATCCTTGCGT TGGCGCATCG CCATCGCCGC TATGGCGTGG GGATGATCTC TCTCAAGCTG CGGCAGGAAG GGCGTCTCGT GAACTATAAG CGGGTGGAGC GGCTGTATTG CGAGCAGCAG CTGCAGGTCC GCCGCCGCAC GCGTAAAAAG GTGCCGGTAG GCGAGCGTGC GCCGTTGCTG CGGCCCACCA AGGCCAACCA GGTGTGGTCG GTGGACGTCG TGTTCGACCG CACCGCCGAA GGCAGGGCAA TCAAATGCCT GGTGATCGTG GACGACGCAA CCCACGAAGC GGTCGCCATC GACGTGGAAC GCGCCATCTC CGGCCACGGG GTAGCACGCG TGCTGGATCG GTTGGCACAC AGTCGCGGCC TGCCGAAGAT GATCCGCACG GACAATGGCA AGGAGTTCTG TGGCAAGGCC ATGGTCGCCT GGGCGCATGC CAATCGTGAG CAGCTACGCC AGATCCAGCC TGGCAAGCCG AACCAGAATG CCTACGTCGA ATCCTTCAAC GGCCGGCTAC GCGACGAATG CCTCAACGAA CACTGGTTCC CAACGCTGCT GCATGCGCGC ACCGAGATCG AACGCTGGCG CCGCGAATAC AACGAACACC GCCCCAAAAA AAAAATCGGC GCAATGACGC CGGCGGCCTA TGCCCAGCAG TTGGCCAATA GCGATATCAT CAACCCCGGA CTCTAA
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Protein sequence | MVSAPARRAL VREWVEGGAS ERCALAAIGM SASALRYRPG EDRNVELRER ILALAHRHRR YGVGMISLKL RQEGRLVNYK RVERLYCEQQ LQVRRRTRKK VPVGERAPLL RPTKANQVWS VDVVFDRTAE GRAIKCLVIV DDATHEAVAI DVERAISGHG VARVLDRLAH SRGLPKMIRT DNGKEFCGKA MVAWAHANRE QLRQIQPGKP NQNAYVESFN GRLRDECLNE HWFPTLLHAR TEIERWRREY NEHRPKKKIG AMTPAAYAQQ LANSDIINPG L
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