Gene PXO_03928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03928 
Symbol 
ID6304068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp565089 
End bp565634 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID642637852 
Productarabinogalactan endo-1,4-beta-galactosidase 
Protein accessionYP_001911737 
Protein GI188574808 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3867] Arabinogalactan endo-1,4-beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGGTCA ACCCGGCGGG CGGTTGGAAC GACGGCCGCG ACACCCTGGA CAAGGCCAAG 
CGTGCCGCCG TGCAAGGCAT GCGCATCATG ATCGACTTCC ATTACAGCGA TAGCTGGGCC 
GCCCCCGGCA AACAGACCAC ACCAGCGGCA TGGGCCGGCC ACTCCGTTGC CCAGCGCAAC 
ACCGATGTCT ATAGCCATAC CCAGGGCATC CTCCAATATC TCAAGGACAA CGGCATCACC 
GTCAGCTGGG TGCAGGTGGG CAACGAGATC AACAGCGGCA TGCTGTGGAA CGACGGCACG 
ACGCCCAACT TCGCCACCCT GGGCCAGTTC ATCAACAGCG GCTACGACGC CACCAAGGCG 
GTGTATCCCA ATGCCAAGGT CGTCGTGCAT TTGACCAACG GCTACGACAA CGCCAATTTC 
CGCTGGTTCT TCGACAACCT GCGTTCGGCA GGCGGCAAGT GGGACGTCAT CGGCATGTCG 
CATTACCCCC CGTCGGCAGC TGGCAGCATT ACAACAGCCG CCTGGACACC AACATGCGCG 
ACATGA
 
Protein sequence
MWVNPAGGWN DGRDTLDKAK RAAVQGMRIM IDFHYSDSWA APGKQTTPAA WAGHSVAQRN 
TDVYSHTQGI LQYLKDNGIT VSWVQVGNEI NSGMLWNDGT TPNFATLGQF INSGYDATKA 
VYPNAKVVVH LTNGYDNANF RWFFDNLRSA GGKWDVIGMS HYPPSAAGSI TTAAWTPTCA 
T