Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03922 |
Symbol | pthXo7 |
ID | 6304061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 559109 |
End bp | 562222 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642637845 |
Product | TAL effector AvrBs3/PthA |
Protein accession | YP_001911730 |
Protein GI | 188574801 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.147648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCAG TGGAGGCAGT GCATGCATGG CGCAATGCAC TGACGGGTGC CCCCCTGAAC CTGACCCCGG ACCAAGTGGT GGCCATCGCC AGCAATATTG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCCGCAATGG CGGCGGCAAG CAGGCGCTGG AGACGGTGCA ACGACTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT ATTGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTGGTGGCC ATCGCCAGCA ATATTGGCGG CAAGCAGGCG CTAGCGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGCCT GACCCCGGAC CAGGTGGTGG CCATCGCCAG CAATGGCGGC AAGCAGGCGC TGGAGACGGT GCAGCGGCTG TTGCCGGTGC TGTGCCAGGA CCATGGCCTG ACCCCGGACC AGGTCGTGGC CATTGCCAGC AATAACGGCG GCAAGCAGGC GCTGGAGACG GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG GACCATGGCC TGACCCCGGA CCAGGTCGTG GCCATCGCCA GCCACGATGG CGGCAAGCAG GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG GTGCTGTGCC AGGACCATGG CCTGACCCCG GACCAGGTCG TGGCCATCGC CAGCCACGAT GGCGGCAAGC AGGCGCTGGA GACGGTGCAG CGGCTGTTGC CGGTGCTGTG CCAGGACCAT GGCCTGACCC CGGACCAGGT GGTGGCCATC GCCAGCAATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCT GGCGCAGGTG GTGGCCATCG CCAGCAATAT TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGTAAT ATTGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGTA ATATTGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGCCT GACCCCGGAC CAGGTCGTGG CCATCGCCAG CAATGGCGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTGGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTG GTGGCCATCG CCAGCCATGG CGGCGGCAAG CAGGCGCTGG AGACAGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TGGTGGCCAT CGCCAACAAT AACGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGCCCA GGTGGTGGCC ATCGCCAGCA ATAGCGGCGG CAAGCAGGCG CTGGAGACGG TGCAACGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAAGTGGTGG CCATCGCCAA CAATAACGGC GGCAAGCAGG CGCTGGAGAT GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTCGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCT GGACCAGGTC GTGGCCATCG CCAGCCACGA TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGCCCA GGTGGTGGCC ATCGCCAGCA ATGGCGGCAA GCAGGCGCTG GAGAGCATTG TTGCCCAGTT ATCTCGCCCT GATCCGGCGT TGGCCGCGTT GACCAACGAC CACCTCGTCG CCTTGGCCTG CCTCGGCGGA CGTCCTGCCC TGGATGCAGT GAAAAAGGGA TTGCCGCACG CGCCGGAATT GATCAGAAGA ATCAATCGCC GCATTCCCGA ACGCACGTCC CATCGCGTTC CCGACCTCGC GCACGTGGTG CGCGTGCTTG GTTTTTTCCA GAGCCACTCC CACCCAGCGC AAGCATTCGA TGACGCCATG ACGCAGTTCG AGATGAGCAG GCACGGCTTG GTACAGCTCT TTCGCAGAGT GGGCGTCACC GAATTCGAAG CCCGCTACGG AACGCTCCCC CCAGCCTCGC AGCGTTGGGA CCGTATCCTC CAGGCATCAG GGATGAAAAG GGCCAAACCG TCCCCTACTT CAGCTCAAAC ACCGGATCAG GCGTCTTTGC ATGCATTCGC CGATTCGCTG GAGCGTGACC TTGATGCGCC TAGCCCAATG CACGAGGGAG ATCAGACAGG GGCAAGCAGC CGTAAACGGT CCCGATCGGA TCGTGCTGTC ACCGGCCCCT CCGCACAGCA ATCTTTCGAG GTGCGCGTTC CCGAACAGCG CGATGCGCTG CATTTGCCCC TCAGCTGGAG GGTAAAACGC CCGCGTACCA GGATCGGGGG CGGCCTCCCG GATCCTGGTA CGCCCATCGC TGCCGACCTG GCAGCGTCCA GCACCGTGAT GTGGGAACAA GATGCGGCCC CCTTCGCAGG GGCAGCGGAT GATTTCCCGG CATTCAACGA AGAGGAGCTC GCATGGTTGA TGGAGCTATT GCCTCAGTCA GGCTCAGTCG GAGGGACGAT CTGA
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Protein sequence | MTAVEAVHAW RNALTGAPLN LTPDQVVAIA SNIGGKQALE TVQRLLPVLC QDHGLTPDQV VAIARNGGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN IGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNIGGKQA LATVQRLLPV LCQAHGLTPD QVVAIASNGG KQALETVQRL LPVLCQDHGL TPDQVVAIAS NNGGKQALET VQRLLPVLCQ DHGLTPDQVV AIASHDGGKQ ALETVQRLLP VLCQDHGLTP DQVVAIASHD GGKQALETVQ RLLPVLCQDH GLTPDQVVAI ASNGGKQALE TVQRLLPVLC QDHGLTLAQV VAIASNIGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN IGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNIGGKQA LETVQRLLPV LCQAHGLTPD QVVAIASNGG GKQALETVQR LLPVLCQDHG LTPDQVVAIA SHDGGKQALE TVQRLLPVLC QDHGLTPDQV VAIASHGGGK QALETVQRLL PVLCQDHGLT PDQVVAIANN NGGKQALETV QRLLPVLCQD HGLTPAQVVA IASNSGGKQA LETVQRLLPV LCQDHGLTPD QVVAIANNNG GKQALEMVQR LLPVLCQDHG LTPDQVVAIA SHDGGKQALE TVQRLLPVLC QDHGLTLDQV VAIASHDGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN GGGKQALETV QRLLPVLCQD HGLTPAQVVA IASNGGKQAL ESIVAQLSRP DPALAALTND HLVALACLGG RPALDAVKKG LPHAPELIRR INRRIPERTS HRVPDLAHVV RVLGFFQSHS HPAQAFDDAM TQFEMSRHGL VQLFRRVGVT EFEARYGTLP PASQRWDRIL QASGMKRAKP SPTSAQTPDQ ASLHAFADSL ERDLDAPSPM HEGDQTGASS RKRSRSDRAV TGPSAQQSFE VRVPEQRDAL HLPLSWRVKR PRTRIGGGLP DPGTPIAADL AASSTVMWEQ DAAPFAGAAD DFPAFNEEEL AWLMELLPQS GSVGGTI
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