Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03921 |
Symbol | |
ID | 6304060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 558054 |
End bp | 558839 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637844 |
Product | transposase |
Protein accession | YP_001911729 |
Protein GI | 188574800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.266691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGGCC TCACCTGCGG TTTTGGCGTG CTGGAACTGC CAGTTTTCGT TACGCTAGGT CCTGGTTTCT GGCAGTTTTC GCCCATGCGG ACACGCCGTC CTGCTGCCGA GCAATTGCCT GCCGATGAGC TGTGTCGTTC GCGTCTGGAG AACCAGATCG ACTTGCGCCA TCCGCTGGTC CAGCTGAGCC ATCGGCTGCC GTGGAGTGCG TTGGAACAGG CGCTGTCGCC ACGGTTGCCT GCAACCACCA GCACAGGCGG TCGGCCCGCA TTGCCGGTGC GGTTGATCGC CGGGTTGCTC TACCTCAAGC ACGCCTACGA CCTGTCCGAC GAGGCGGTCT GCGAGCGCTG GCTGGAAAAT CCGTACTGGC AGTTCTTCAC CGGCGAGGTG GTGTTCCAGA CCTGCGTGCC GTGCGATCCC AGCTCCCTGA CCCGTTGGCG ACAGCGTCTG GGCGAAGCCG GGATGGAAGC GCTGTTGGCG CATACGATCA ACACCGCTCA CGCGATGAAG GCGGTGGACG CACGCGAGTT GTCGCGGGTG ATCGTGGATA CCACCGTGCA GGAAAAAGCG ATCGCCCATC CCACCGACAG CCGTTTGCTG GAGGTGGCGC GCAAGAAGCT GGTGCTGCTG GCCAAGCGAC ACGGCATCGC ACTGCGACAG AGCGATGCGC GGCAAGGTCC GGGGTTGAGC CGCAAGGCCG GGCGCCATGT GCATGCGCAT GCGCGCCAGT TCAAGCGCAT GCGCAAGGTG CTGCGACGCC AACGCACGAT CCTGGGACGC GTATGA
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Protein sequence | MQGLTCGFGV LELPVFVTLG PGFWQFSPMR TRRPAAEQLP ADELCRSRLE NQIDLRHPLV QLSHRLPWSA LEQALSPRLP ATTSTGGRPA LPVRLIAGLL YLKHAYDLSD EAVCERWLEN PYWQFFTGEV VFQTCVPCDP SSLTRWRQRL GEAGMEALLA HTINTAHAMK AVDARELSRV IVDTTVQEKA IAHPTDSRLL EVARKKLVLL AKRHGIALRQ SDARQGPGLS RKAGRHVHAH ARQFKRMRKV LRRQRTILGR V
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