| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03884 |
|---|
| Symbol | |
|---|
| ID | 6303851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 349114 |
|---|
| End bp | 350082 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642637640 |
|---|
| Product | IS1112 transposase |
|---|
| Protein accession | YP_001911525 |
|---|
| Protein GI | 188574596 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTGC CCATGTCATC CAGCCGCCTG GACCTGTCAG AACGATACCG CCTACATGCG
TTATATGAAA CCGGGATGTC GATGCGCGCC ATCGCCGATG CAGTGGCGCG TGCGCCCAGC
ACGATCAGTC GTGAGCTGCG CCGCAACCGG CACGCGGCGA AGTATCGGCC CGATCACGCG
CAGCGCATCA GCGAGCATCG GCGCGCACAG GCCAGCCGGC GACCACGCAT CGACGCTGAG
CGTATCCGTC AGATCGAGGT CCTGCTGAGG GAGGACGCCA GTCCCGAACA GATCGCCGGC
CGCACCGGCT TGGCCAGTCA CGCATGGATC TATCGGCACA TCGACGCCGA TCAGAAGCGC
GGTGGTCAGT TGTTCATGCA TCTACGCAAA CGCCGCCGCA AGCGCCGTCG GCGTGGCGTG
CGCGATGGCC GCGGGCAGCT GACGCATCGG CGCAGCTGGA CACAGCGCCC CAGTGTGGTT
GAGCAGCGAA GCCGTATCGG CGACTGGGAG CTGGAGACCA TCAGGGCCTC ACACGGAAAG
GGCGTGGTGG TCAGCATGAC CGAACGCCGC AGTCGCCTGC ATCTGCTGGC TTACTCGCCC
GACGGCACCG CCGAGAACGT GCGCAACGCC ATTGTCCAGC GACTGGGCGG CCTGCGCCAT
GCAGTTCACA CCCTCACCGC CGACAACGGC AAGGAGTTCG CTGATCATCG GCTCATTGCC
GCCTGCCTGC AGAGCGATTT CTATTTCGCA GATCCGTACT GCCCATGGCA GCGCGGCAGC
AACGAGAATG CCAACGGATT GACACGCCAA TACCTGCCAC GACAGACCGA TGTCAGCACC
ATCACCGATG CGCACCTGCG ATGGATCGAG CAGCGGCTCT ACAATCGTCC GCGCAAGATA
CTTGGATTCA AAACGCCCCT CGAAGTCTTC TCCGAGGAGG TCCTCAACAG CGTTGCGAAT
CAGAGTTGA
|
|---|
| Protein sequence | MELPMSSSRL DLSERYRLHA LYETGMSMRA IADAVARAPS TISRELRRNR HAAKYRPDHA
QRISEHRRAQ ASRRPRIDAE RIRQIEVLLR EDASPEQIAG RTGLASHAWI YRHIDADQKR
GGQLFMHLRK RRRKRRRRGV RDGRGQLTHR RSWTQRPSVV EQRSRIGDWE LETIRASHGK
GVVVSMTERR SRLHLLAYSP DGTAENVRNA IVQRLGGLRH AVHTLTADNG KEFADHRLIA
ACLQSDFYFA DPYCPWQRGS NENANGLTRQ YLPRQTDVST ITDAHLRWIE QRLYNRPRKI
LGFKTPLEVF SEEVLNSVAN QS
|
|---|
| |