| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03860 |
|---|
| Symbol | uxaC |
|---|
| ID | 6303872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 370331 |
|---|
| End bp | 371728 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642637661 |
|---|
| Product | glucuronate isomerase |
|---|
| Protein accession | YP_001911546 |
|---|
| Protein GI | 188574617 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1904] Glucuronate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.089523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATCCCG ATCGTTTGCT GCCGGCCGAT CCCGGCACGC GCGCGATCGC CGGCTGCCTG
TACGCACAGA TTGCAACGCT GCCGATCATC AGCCCACATG GCCACACCGA CCCGGCATGG
TTCGCCACCA ATGCACCGTT CGCTGACGCT ACCGAATTGC TGTTGGTGCC GGACCACTAT
GTGTTCCGCA TGTTGTACAG CCAGGGCATC GACCTGGATG CGATCGGCAT TCCGCGCGCC
GATGGCATGC GCGCAGCCGT CGACCCACGT GCGGCATGGC GCGTGTTTGC CGCGCATTAC
ACGGTGTTGC GCGGCACGCC GTCGGCACTG TGGCTCAATC ATGTCTTCCA CGACGTCTTC
GATCTACGCC TCCGGCTCGA TGCCGGCACC GCCGACCACT ATTACGACCA CATTACCGCT
GCGCTGCAGA CACCTGACTT TCTGCCGCGC GCGCTGTTTG AGCGCTTCAA TATCGAAGTG
ATCGCCACCA CCGAATCGCC GCTGGATCCG CTGCACCACC ATGCAGCGAT TGCCGCCAGC
GGTTGGCAGG GACGGGTGGT GACGGCATAT CGCCCCGACC CGGTGGTGGA CCCGGAGCAC
GAGCAGTTTG CCGGTGCCTT GCAGCAATTC GGCGCGCTCA CCGGCGAGGA TGTGCTGACC
TGGAATGGTT ACCTGCGTGC GCATCGGCAA CGGCGTGCAT TCTTTGCCGC ACACGGCGCC
ACCTCGACCG ATCATGGCCA TCCCAGCGCC GCCACCGCCG ATTTGTCGCC GGCCCAAGCG
CAGCGCCTGT TCGACACGGT GGTGCGCGGT GCCGCCACGC CGGAACAGGC GGAGCTGTTC
CGCGCACAAG TGTTGACCGA AATGGCGGCG ATGAGCCTGG ACGATGGCTT GGTGATGCAA
CTGCATCCAG GCTGTTTCCG TAATCACAAT CGGCCGTTGT TCGAGCGCTA CGGACGCGAC
AAAGGTGCCG ATATTCCGAT GCGCACCGAC TACGTGCATG CGCTCAAGCC GTTGCTGGAT
CGCTACGGCA ACGACCGGCG CCTGCGCTTG ATCGTGTTTA CCCTGGACGA GACCAGCTAC
AGCCGTGAGC TCGCGCCATT GGCCGGCCAT TATCCATCCC TGCTGCTCGG CCCCGCATGG
TGGTTCCATG ACGCGCCCGA GGGTATGTGG CGCTTCCGTG AGCAGACCCT GGCCAGTGCC
GGCTTCTACA ACACCGTCGG CTTCAACGAC GACACCCGCG CCTTCCTGTC GATTCCGGCG
CGGCACGATG TGGCCCGGCG TGTGGACAGC GCCTTCCTCG CCAAACTGGT TGCCGAGCAT
CGGCTGGAAG AAGACGAGGC GACCGAGCTG GCGATCGATA TGGCGTATCG CATGCCCAAG
CGGGCCTACA ACCTGTAA
|
|---|
| Protein sequence | MHPDRLLPAD PGTRAIAGCL YAQIATLPII SPHGHTDPAW FATNAPFADA TELLLVPDHY
VFRMLYSQGI DLDAIGIPRA DGMRAAVDPR AAWRVFAAHY TVLRGTPSAL WLNHVFHDVF
DLRLRLDAGT ADHYYDHITA ALQTPDFLPR ALFERFNIEV IATTESPLDP LHHHAAIAAS
GWQGRVVTAY RPDPVVDPEH EQFAGALQQF GALTGEDVLT WNGYLRAHRQ RRAFFAAHGA
TSTDHGHPSA ATADLSPAQA QRLFDTVVRG AATPEQAELF RAQVLTEMAA MSLDDGLVMQ
LHPGCFRNHN RPLFERYGRD KGADIPMRTD YVHALKPLLD RYGNDRRLRL IVFTLDETSY
SRELAPLAGH YPSLLLGPAW WFHDAPEGMW RFREQTLASA GFYNTVGFND DTRAFLSIPA
RHDVARRVDS AFLAKLVAEH RLEEDEATEL AIDMAYRMPK RAYNL
|
|---|
| |