Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03845 |
Symbol | rdgC |
ID | 6303887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 389918 |
End bp | 390823 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642637676 |
Product | recombination associated protein |
Protein accession | YP_001911561 |
Protein GI | 188574632 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2974] DNA recombination-dependent growth factor C |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCTTTC GCAATCTCAC CCTGTTCCGC TTTCCCACCA CCCTGGATTT TTCGCAGATC GACACGCTGC TGCCGCCCGT GCAGCTCAAG CCGGTCGGCC CGCTGGAAAT GAGCTCGCGC GGTTTCATTT CCCCGTTCGG TCGTGACGAG CAGGGTGTGC TTTCGCACCG TCTGGAAGAT TTTCTGTGGC TCACCGTCGG TGGCGAGGAC AAGATCCTGC CTGGCGCGGT GGTCAACGAT CTGCTCGAGC GCAAAGTCGC CGAGATCGAG GAAAAGGAAG GCCGCCGCCC CAGTGGCAAG GCACGCAAGC GCCTCAAGGA CGACCTGATC CATGAGCTGC TGCCGCGCGC CTTCGTCAAG AGCTCGCGCA CCGACGCCAT CCTGGACCTG CAGCACGGCT ATATCGCGGT CAACAGTTCC AGCCGTAAGA GCGGCGAGAA CGTGATGAGC GAGATCCGCG GGGCGCTGGG CAGCTTCCCG GCGCTGCCGC TCAATGCCGA AGTGGCTCCG CGCGCCATCC TCACCGGCTG GATTGCCGGC GAGCCCCTGC CCGAAGGCCT GAGCCTGGGC GAAGAGTGCG AGATGAAGGA CCCCATCGAA GGCGGTGCGG TGGTCAAGTG CCAGCATCAG GAACTGCGCG GCGACGAGAT CGACAAGCAT CTGGAAGCCG GCAAGCAGGT CACCAAGCTG GCGCTGGTGC TGGACGACAA TCTGTCGTTC GTGCTCGGCG ACGATCTGGT GATTCGCAAG CTCAAGTTCC TCGACGGTGC CCTGGATCAG CTCGAACACA GCGAAGACGA TGGCGCGCGC GCCGAACTCG ACGCACGCTT TACGCTGATG AGCGCGGAAA TCCGCCGGCT GTTCCTGTTG CTGGAAACCG CGTTGAAGTT GAGCAAGGCA GAGTAA
|
Protein sequence | MFFRNLTLFR FPTTLDFSQI DTLLPPVQLK PVGPLEMSSR GFISPFGRDE QGVLSHRLED FLWLTVGGED KILPGAVVND LLERKVAEIE EKEGRRPSGK ARKRLKDDLI HELLPRAFVK SSRTDAILDL QHGYIAVNSS SRKSGENVMS EIRGALGSFP ALPLNAEVAP RAILTGWIAG EPLPEGLSLG EECEMKDPIE GGAVVKCQHQ ELRGDEIDKH LEAGKQVTKL ALVLDDNLSF VLGDDLVIRK LKFLDGALDQ LEHSEDDGAR AELDARFTLM SAEIRRLFLL LETALKLSKA E
|
| |