| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03838 |
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| Symbol | tatC |
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| ID | 6303894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 396875 |
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| End bp | 397630 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642637683 |
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| Product | twin arginine-targeting protein translocase TatC |
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| Protein accession | YP_001911568 |
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| Protein GI | 188574639 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.362627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTGT TCGACGACGC ACAGGCCGAA AGCAGTCTGA TCGAGCATCT GGTCGAATTA
CGCGCCCGCC TGGTGCGCGC GCTGATCGGT CTGGGCGTGG TGCTGCTGAC CTTGCTGCCG
TTCTCGCGGG CGATTTACTC GTGGCTGGCT GCGCCGCTGA TTTCGCAGCT GCCGCTGGGG
CAGACCATGA TCGCGATGAA CCCGGCCGGT GCGTTCTTCG CCCCGCTCAA ACTCACCTTC
TTCGTGGCAG TGTTCTTCAG CGTGCCGTGG TTGCTGTATC AGGCCTGGGC ATTCGTGGCG
CCGGGGTTGT ACCAGCGCGA AAAGAAACTG GCATTTCCGC TGCTGGCTTC GGCGGTGGCG
CTGTTTTACA TCGGCTGTGC GTTCGCGTAT TTCCTGGTGT TGCCGGCGGT GTTCCACTTC
CTGACCACGT TCAAGCCGGA CGTGATCGCC ATTACCCCGG ACGCCAATTC GTACCTGGAT
TTCGTCCTGG CCATCTTCTT CGCCTTCGGT GCCAGTTTCG AGCTGCCGGT GGCATTGGTG
ATCCTGGTGC TGCTGGGCTG GGTCACACCG AAGCAACTCA GTGAGGGCCG TGGCTACGCC
ATCGTCGGCA TCTTCATCCT GGCCGCCGTG CTCACCCCGC CAGACGTCGT GTCGCAGCTG
ATGCTGGCCC TTCCGATGTG CCTGCTCTAC GAGCTGGGCA TCATGGCCTC GCGTGCGGTG
GCACCGAAGG ACGCGGCGTC CAACGCTGCT GGTTGA
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| Protein sequence | MSLFDDAQAE SSLIEHLVEL RARLVRALIG LGVVLLTLLP FSRAIYSWLA APLISQLPLG
QTMIAMNPAG AFFAPLKLTF FVAVFFSVPW LLYQAWAFVA PGLYQREKKL AFPLLASAVA
LFYIGCAFAY FLVLPAVFHF LTTFKPDVIA ITPDANSYLD FVLAIFFAFG ASFELPVALV
ILVLLGWVTP KQLSEGRGYA IVGIFILAAV LTPPDVVSQL MLALPMCLLY ELGIMASRAV
APKDAASNAA G
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