Gene PXO_03832 details

Gene Information

• Locus tag: PXO_03832
• ID: 6303900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 410145
• End bp: 411959
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642637689
• Product: type II secretory pathway ATPase
• Protein accession: YP_001911574
• Protein GI: 188574645
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGC GGCGCACCGC CGATCCGGAC AACGCCGTGG CATTGCTGCC GCGCGGCCGG 
CTGATGTTCG ACCCGGTGGC TGCGGCCCTG CTGGCCGACG GCATGGTGGT GCCCCACGAA 
CACGAGCGTG TGCAGTTTTC CGCCAGCGGC GCGCGCAGTG CCAGCGATGT GCATCCGCTG 
GTGCTGCTGG CCAATCTGAA ATTGCATGCG GCGCAACCGC CGGCCGGCGA GCTCGGACTG 
GAGCGGCTGA CCGAGTGGCT GGCCACGCGC ACCGGGCTAC GCTATCTGCG CATCGACCCC 
ACTCGCATCG ATGTCGCCGC CGTGACCGGC GTGGTCTCGC ACGCCTATGC GCGCCGCCAT 
CGCATCCTGC CGTTGGCGCT GGGTGCCGAG CGCGTGCTGA TCGCCACCAG CGAGCCGCTG 
GCGCTGGACT GGCTGGCCGA CGTGCAGCAT CTGAGCCGGC GCCGCATCGA GCTGGCGCTG 
ATCAACCCGC TGGATCTGCA TCGCTACACG ATGGAGTTCT TCGGTGTCAC GCAGTCGGTG 
CGCGGCGCGC GTAGCGATGC ACGCAGCACC GAATCCAACG TCGGCCTGCC CAGCTTCGAA 
CAACTGGTGG AACTGGGCCG CGCCGGCGAC GTCAACGCCG ACGACCACCA CATCGTGCAT 
ATCGTCGACT GGCTGCTGCA GTACGCCTAC GAACAGCGGG CAAGCGACAT CCATCTGGAG 
CCGCGCCGCG ACGCCGGGCG CATGCGCTTC CGCATCGACG GCGTACTGCA CAAGGTGCTG 
GAAGTGCCGC CGTCGGTGAT GACCGCGGTG GTCAGCCGCA TCAAGGTGCT GGGCCGCATG 
GATCTGGCCG AACGCCGGCG TCCGCAGGAT GGCCGCATCA AGACCCGCTC GCCCGGCGGG 
CGCGAAGTGG AAATGCGCTT GTCGACGATG CCCACCGCAT TCGGCGAAAA GTGCGTGATG 
CGTATCTTCG ACCCGGATTC GGCATTCAAG AGCATCGAGC AGTTGGGTTT CAGCCCCGAA 
GAAGCGGCCG GCTGGAGCGC GCTGGTCGAG CGTCCGCACG GCATCGTGCT GGTCACCGGC 
CCGACCGGCT CAGGCAAGAC CACCACGCTG TATTCCACGC TCAAACGCCT GGCCACGCCG 
GATGTGAACG TGTGCAGCGT GGAAGACCCG ATCGAAATGA TCGCGCCGGA ATTCAACCAG 
ATGCAGGTGC AGCAGAACAT CGACCTGGAT TTCGCCAGCG GCGTGCGCAC GCTGCTGCGC 
CAGGATCCGG ACATCATCAT GATCGGCGAA ATCCGCGACC TGGAAACCGC GCAAATGGCG 
GTGCAGGCCT CGCTTACCGG GCATCTGGTG TTGTCGACGT TGCACACCAA CGACGCGGCC 
TCTGCGATCA CCCGCCTGCT CGATCTGGGC GTACCCCATT ACCTGGTGGC CTCCACGCTC 
AACGGCGTGC TGGCGCAGCG GCTGGTACGC ACGCTGTGCG TGCATTGCAA GCGCCCGCAC 
ACGCTCAGCG ACGCCGACTG GGCGGCCATC CGCGAACCCG GCGAAGCGCT GCCGGAACCA 
CTCAACGTGC ACGCGCCGGT CGGCTGCCTG GAATGCCGCC GCACCGGCTA TCTGGGCCGG 
GTGGGCCTGT ACGAACTGCT GCCGGTTACC CCGCACCTGC GCACCCTGAT CCGCCCGGAC 
ACGGAACTTG CCAGCTTCAG CCAGGCTGCC CGCGGCGAAG GCCTGCGCAC GCTGCGCCGC 
ACCGGGCTGG AGAAGGTCGC CGCCGGGCTG ACCACCATCG AAGAAGTACT GTCGGTGTTG 
CCGCCGCGGG AATAG 

 

Protein sequence

MEQRRTADPD NAVALLPRGR LMFDPVAAAL LADGMVVPHE HERVQFSASG ARSASDVHPL 
VLLANLKLHA AQPPAGELGL ERLTEWLATR TGLRYLRIDP TRIDVAAVTG VVSHAYARRH 
RILPLALGAE RVLIATSEPL ALDWLADVQH LSRRRIELAL INPLDLHRYT MEFFGVTQSV 
RGARSDARST ESNVGLPSFE QLVELGRAGD VNADDHHIVH IVDWLLQYAY EQRASDIHLE 
PRRDAGRMRF RIDGVLHKVL EVPPSVMTAV VSRIKVLGRM DLAERRRPQD GRIKTRSPGG 
REVEMRLSTM PTAFGEKCVM RIFDPDSAFK SIEQLGFSPE EAAGWSALVE RPHGIVLVTG 
PTGSGKTTTL YSTLKRLATP DVNVCSVEDP IEMIAPEFNQ MQVQQNIDLD FASGVRTLLR 
QDPDIIMIGE IRDLETAQMA VQASLTGHLV LSTLHTNDAA SAITRLLDLG VPHYLVASTL 
NGVLAQRLVR TLCVHCKRPH TLSDADWAAI REPGEALPEP LNVHAPVGCL ECRRTGYLGR 
VGLYELLPVT PHLRTLIRPD TELASFSQAA RGEGLRTLRR TGLEKVAAGL TTIEEVLSVL 
PPRE