Gene PXO_03806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03806 
SymboltetR 
ID6303921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp434226 
End bp434846 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID642637710 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001911595 
Protein GI188574666 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTATC GACGCTCCGC ACTGATGGAA GAACGCCTGG CCGGCAACCG CGAACGCATC 
CTGCACGCGG CCCGCATCCT GATCGCCGAA GGCGGCTACC GCAACGCACA GGTGACTGCG 
TTGGCAGCCG CTGCGGGCGT TTCGACCGGG CAGATTTATC GGCATTTCCC ATCAAAAGCG 
GAGCTTTTCG TGGAAGTTCT CAACGAGGCC GTACAGCGTG AGACAACCAT CCTGCGTGCT 
ATCGCCGCCA CTCAGGCCAG CGCTGCCGGG CGTTTGCGCA GCGCGATCGC CACCTTCGTA 
CGGCGCGCCC TGGCTGGCCC AGCGCTGGCC TACGCCTTTA TCGCCGAGCC GGTAGAGAGC 
GAGGTGGACG CCGCGCGTAT CCGTGGCCGG CGCCTGTTCG GGGAGGTTTT TCGCCAGCTG 
CTTGCGGAAG GTGTGGCGGC TGGGGAGTTC CCGCAGCAGT CGCTGGATGC CGCCGCGGCC 
TGCATCGTCG GCGCGTTTAC CGAAGCCTTG GTCGGGCCGA TCGCCCCCAG CCGTGGCGAT 
CCGCAGCAGG GCGAGCAGCT GGTCGAAGCG ATCTGCGGCT TCTGCCTGCG CGCGGTGGGC 
GCAATGCAAC CGACCAGCTG A
 
Protein sequence
MAYRRSALME ERLAGNRERI LHAARILIAE GGYRNAQVTA LAAAAGVSTG QIYRHFPSKA 
ELFVEVLNEA VQRETTILRA IAATQASAAG RLRSAIATFV RRALAGPALA YAFIAEPVES 
EVDAARIRGR RLFGEVFRQL LAEGVAAGEF PQQSLDAAAA CIVGAFTEAL VGPIAPSRGD 
PQQGEQLVEA ICGFCLRAVG AMQPTS