| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03741 |
|---|
| Symbol | |
|---|
| ID | 6303985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 489521 |
|---|
| End bp | 491026 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642637772 |
|---|
| Product | AMP-ligase |
|---|
| Protein accession | YP_001911657 |
|---|
| Protein GI | 188574728 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTGCC GTGCCGCACA ACGCGCACGC CGCCTACACA CATGTGCAAG CCATCGACAC
AAGACGCGCT CGCCGCGGTT TGCCGCAGAG GGAACTTCCC GACTTGCCAG CAGCGCGGGT
GGCGGACAAG CTAGCGTGCT CTTGCGACCG ACGGTTTTCA TGTCCAGCCT GCCTGCTCCC
CCTATTTCCC ATCCGATGGC TGTTGGTGCG CTCGACCGGC CGCTGGCCTG GCGCGCGGGG
CAGTCGGTCG ATCTGGCCAC CTTCATCGCG CATGTGCACG GTCTGGCGCA GCAGCTGCCT
GAAGGTAGCC ATGCAGTGAA TTTGTGCGAG GACCGCTACC GTTTCATGGT GGCGTTCTAC
GCGTGCGCGC TGCGCGGGCA GGTATCGCTG CTGCCATCGT CGCGTGCACC TGCGGTAGTG
GGCGAAGTGC AGGCGCGCCA CGCCGATGCG TACTGCCTGG GCGATCTGGA CCTGGAGCTC
GCGCCGCCGC GGTATTGGCA GCTGCCTGCC GAATTGCCGC AGGCTGCGGG CCCGATTCCA
CAGTTGGCCG ACGACGCGCT GGTGGCGATC GGTTTCACCT CGGGCACCAC CGGCAGCCCG
CAACCCAATC CCAAGACCTG GGGCAGTTTC CTGACCAGCA CGCGCCAGGA TCTGGTCGCG
CTGGAAAGCC TGTGGGCGCA CACCGACGCT GTGCCGCACG TGGTCGCCAC GGTGCCGCCG
CAGCACATGT ATGGCATGGA GTTGTCGGTG CTGCTGCCGA TGGTGACCAC CCTGGCAGTG
CACGCCGAGC GCCCGTTCTT CCCGGACGAT GTGGCGCGTG CGCTGGCCGA TATTCCCGCG
CCGCGTGTCT TGGTGACCAC GCCCGTGCAT CTGCGTGCGT TGGTCGAATC CGGCGTGGCA
CTGCCGCCGC TGGCCGGCAT CGTGTCGGCC ACTGCACCGA TGGCGCCGGA AATCGCCGCT
GCGGCCGAAG CGCGTTTCGG TGGTGAAGTG CGCGAGATGT TCGGCTCCAC CGAAACCTGC
GTGTTCGCCG TGCGTCGCAC GGCGCTGGAA GCGGCATGGA CGCCTTTGCC CGGTGTGCGC
CTGGAAACGC AGGCCGCAGG CACGCTGGTG CATGCGCCGC ATCTGGCCAC ACCGGTGCTG
CTGGCCGACA TGATGGACGT GGCCGACGAC GGCCGTTTTC AGGTACGCGG CCGTCAAGCC
GATCTGCTGG AAATTGCCGG AAAACGCGCA TCGCTGGCCG ATCTCACCCG GCGCCTGCTC
GCCATTCCCG GTGTGGTCGA TGGCACCATC GTGCAACTCG CGCCCGACTC CGGCCAGGCG
GTCGGCCGCA TCGCCGCGCT GGTGGTCGCT CCCTCCCTGG ACGAAGCCCA GGTGCTGGCC
GCACTGCGCG TCAGCGTAGA CCCGGTGTTC CTGCCGCGCC GTCTGCGCAA GGTCGCCGCA
TTGCCACGCA ACGAAACCGG CAAACTGCCG CGCGATGTGG TGCTGGGCTT GCTCAAGGGT
GAGTGA
|
|---|
| Protein sequence | MICRAAQRAR RLHTCASHRH KTRSPRFAAE GTSRLASSAG GGQASVLLRP TVFMSSLPAP
PISHPMAVGA LDRPLAWRAG QSVDLATFIA HVHGLAQQLP EGSHAVNLCE DRYRFMVAFY
ACALRGQVSL LPSSRAPAVV GEVQARHADA YCLGDLDLEL APPRYWQLPA ELPQAAGPIP
QLADDALVAI GFTSGTTGSP QPNPKTWGSF LTSTRQDLVA LESLWAHTDA VPHVVATVPP
QHMYGMELSV LLPMVTTLAV HAERPFFPDD VARALADIPA PRVLVTTPVH LRALVESGVA
LPPLAGIVSA TAPMAPEIAA AAEARFGGEV REMFGSTETC VFAVRRTALE AAWTPLPGVR
LETQAAGTLV HAPHLATPVL LADMMDVADD GRFQVRGRQA DLLEIAGKRA SLADLTRRLL
AIPGVVDGTI VQLAPDSGQA VGRIAALVVA PSLDEAQVLA ALRVSVDPVF LPRRLRKVAA
LPRNETGKLP RDVVLGLLKG E
|
|---|
| |