| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03711 |
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| Symbol | rpoH |
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| ID | 6304016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 518368 |
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| End bp | 519216 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642637801 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001911686 |
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| Protein GI | 188574757 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAACA ATCTCCCGAT TCCCAGTGCG CTCGGTTCGC TGGACGCCTA CATCGGTGCC
GTGCACCAGA TTCCGGTGCT GTCGGTCGAT GAGGAGCAGA ATCTGGCCCG CCGCTTCCGC
GACGAGCTGG ATTTGGACGC CGCGCGCGAA CTGGTCCATT CCCACCTGCG CTTCGTGGTG
CATGTGGCCC GCGGCTATAA CGGCTACGGC CTGCCGCTGG GCGACCTGAT CCAGGAAGGC
AATATCGGCC TGATGAAGGC GGTCAAGCGC TTCGACCCGG ACATGGGCGT GCGTTTGGTC
AGCTTCGCGG TGCACTGGAT CCGTGCCGAA ATGCACGAGT TCATCCTGAA GAACTGGCGC
ATCGTCAAGG TTGCCACGAC CAAGGCGCAG CGCAAGCTGT TCTTCAACCT GCGCAAGTCC
AAGACCCGTC TGGGCTGGCT CAATGCGTCG GAAGTGACTG CGGTCGCCAA GGACTTGAAC
GTCTCAGAGC GTGAAGTGAT GGAGATGGAG TCGCGTCTGT CTGGTCGCGA CATCGGTTTC
GACGCCTCGT CCGACGAAGA CGACGATCAC GGCCCGCCGT CGCCGGTGAG CTACCTGGTC
GCCAACGAAG AAGACCCGTC GCAGGCGTAC GAGCGCCACG ACAGCGAAGA CAACCAGTTG
CAGTTGCTGC GCGAAGGCAT GGCCGGTCTG GATACGCGTT CGCGCGACAT CGTCAAGCGT
CGCTGGCTGG ATTCGGATTC CAAGGTGACG CTGCAGGAGC TGGCCGATGA GTACGGCGTG
TCGGCCGAGC GTATCCGCCA GATCGAGGCG AATGCGCTGA AGAAGATGAA GGCGCTGTTC
GTCGCCTGA
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| Protein sequence | MANNLPIPSA LGSLDAYIGA VHQIPVLSVD EEQNLARRFR DELDLDAARE LVHSHLRFVV
HVARGYNGYG LPLGDLIQEG NIGLMKAVKR FDPDMGVRLV SFAVHWIRAE MHEFILKNWR
IVKVATTKAQ RKLFFNLRKS KTRLGWLNAS EVTAVAKDLN VSEREVMEME SRLSGRDIGF
DASSDEDDDH GPPSPVSYLV ANEEDPSQAY ERHDSEDNQL QLLREGMAGL DTRSRDIVKR
RWLDSDSKVT LQELADEYGV SAERIRQIEA NALKKMKALF VA
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