| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03677 |
|---|
| Symbol | |
|---|
| ID | 6303703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 178500 |
|---|
| End bp | 179918 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642637496 |
|---|
| Product | putative ISXoo4 transposase |
|---|
| Protein accession | YP_001911381 |
|---|
| Protein GI | 188574452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGTTA CGCTACGTCC TGGTTTCTGG CAGTTTTCGC CCATGCGGAC ACGCCGTCCT
GCTGCCGAGC AATTGCCTGC CGATGAGCTG TGTCGTTCGC GCCTGGAGAA CCAGATCGAC
GTGCGCCATC CGCTGGTCCA GCTGAGCCAT CGGCTGCCGT GGAGTGCGTT GGAGCAGGCG
CTGTCGCCGC GGTTGCCGGC CACCACCGGC ACAGGCGGTC GGCCCGCATT GCCGGTGCGG
TTGATCGCCG GGTTGCTTTA CCTCAAGCAC GCCTACGACC TGTCCGATGA AGCGGTCTGC
GAGCGCTGGC TGGAAAATCC GTACTGGCAG TTTTTCACCG GCGAGGTGGT GTTCCAGACC
TGCGTGCCGT GCGATCCCAG CTCCCTGACC CGTTGGCGAC AGCGTCTGGG CGAAGCCGGG
ATGGAAGCGC TGTTGGCGCA CACGATCAAC ACCGCTCACA CGATGAAGGC GGTGGATGCG
CGCAAGTTGT CGCGGGTGAT CGTGGATACC ACCGTGCAGG AAAAAGCGAT CGCCCATCCC
ACCGACAGCC GTTTGCTGGA GGTCGCGCGC AAGAAGCTGG TGCTGCTGGC CAAGCGACAC
GGCATTGCAC TGCGACAAAC CTATGCGCGG CAAGGTCCGG GGTTGAGCCG CAAGGCCGGG
CGCCATGCGC ATGCGCGCCA GTTCAAGCGC ATGCGCAAGG TGCTGCGACG CCAACGCACG
ATCCTGGGAC GCGTATCACG CGATCTGCAA CGCAAGCTGG CCCAGCTGGA ACCGTCGGTA
CGTGAGCGCA TCGGTGTCTG GTTGGAGCGC GCGCAACGGT TGTTGGCACA GCGTCCCAAG
GACAAACAAA AACTCTACGC CTTGCACGCG CCGGAAGTGG ACTGCATGAG CAAGGGCAAG
GCAAGCAGCC CCTACGAATG TGGCGTCAAG GTCGGCATTG CGGTGAGTGC GCGCAAGGGC
TTGATCGTGG GCGCGCGCAG TTTTCCCGGT CATCCCTACG ACGGCGATAC GTTGGCCGAG
CAACTGGAAC AGGCGCGCGG GCTGCTGCAG GATGTGAATG TGATCCCGCA GGTGGCGATC
GTGGACTTGG GGTATCGCGG GCGGGACGTG GAGGGTGTGC AGATCCTGCA TCGGGGCAAA
GCCAAGACGC TGACACGACG GCAATGGCGC TGGATCAAAC GACGGCAAGC GGTAGAGCCG
GTGATCGGAC ATCTGAAACA GGACTGCCGC TTGAATCGCT GCCATCTCAA CGGCGCCCAA
GGCGATGCAC TGCACGTGCT CGGCTGCGCC GCTGGCGACA ACCTGCGGTG GCGGCTGCGC
TGGATCGCCT TTTTGCGTGC CTGGTTGCAG GTGGTGCGGG CGCGCCCCTC AACGCGCTCA
AGCATCATGT GGCCGGCAAA CATGGCATTT GGTGTTTGA
|
|---|
| Protein sequence | MFVTLRPGFW QFSPMRTRRP AAEQLPADEL CRSRLENQID VRHPLVQLSH RLPWSALEQA
LSPRLPATTG TGGRPALPVR LIAGLLYLKH AYDLSDEAVC ERWLENPYWQ FFTGEVVFQT
CVPCDPSSLT RWRQRLGEAG MEALLAHTIN TAHTMKAVDA RKLSRVIVDT TVQEKAIAHP
TDSRLLEVAR KKLVLLAKRH GIALRQTYAR QGPGLSRKAG RHAHARQFKR MRKVLRRQRT
ILGRVSRDLQ RKLAQLEPSV RERIGVWLER AQRLLAQRPK DKQKLYALHA PEVDCMSKGK
ASSPYECGVK VGIAVSARKG LIVGARSFPG HPYDGDTLAE QLEQARGLLQ DVNVIPQVAI
VDLGYRGRDV EGVQILHRGK AKTLTRRQWR WIKRRQAVEP VIGHLKQDCR LNRCHLNGAQ
GDALHVLGCA AGDNLRWRLR WIAFLRAWLQ VVRARPSTRS SIMWPANMAF GV
|
|---|
| |